Toolboxes for SPM (http://www.fil.ion.ucl.ac.uk/spm/) developed at Freiburg Brain Imaging (http://fbi.uniklinik-freiburg.de/)
The Janelia Automated Animal Behavior Annotator
The Janelia Automatic Animal Behavior Annotator (JAABA) is a machine learning-based system that enables researchers to automatically compute interpretable, quantitative statistics describing video of behaving animals. Through our system, users encode their intuition about the structure of behavior by labeling the behavior of the animal, e.g. walking, grooming, or following, in a small set of video frames. JAABA uses machine learning techniques to convert these manual labels into behavior detectors that can then be used to automatically classify the behaviors of animals in large data sets with high throughput. JAABA combines an intuitive graphical user interface, a fast and powerful machine learning algorithm, and visualizations of the classifier into an interactive, usable system for creating automatic behavior detectors. Documentation is available at: http://jaaba.sourceforge.net/
Java-based scientific graphics
Java-based scientific graphics with support for Java, Groovy, MATLAB, Python, the R statistical environment, Scala and SciLab.
sigTOOL provides a user-extendable signal analysis environment for processing electrophysiological data within MATLAB. Neuron spike-train, + spectral and time-domain analyses are built in. See http://dx.doi.org/10.1016/j.jneumeth.2008.11.004
An open-source OMR application written in MATLAB, capable of processing various pen or pencil marked documents. The document form is fully customizable so that common surveying forms as well as academic omr-based exam sheets can be processed.
Tools for mass spectrometry, especially for protein mass spectrometry and proteomics: Quantification tools, converters for Applied Biosystems (Q Star and Q Trap), calculation of in-silico fragmentation spectra, converter for Mascot result files
A community repository to develop Commodity Grid (CoG) Software for the access of Grids, through high level interfaces. The main repository is maintained at http://www.cogkit.org
The Databionics ESOM Tools offer many data mining tasks using Emergent Self-Organizing Maps. Visualization, clustering, and classification of high-dimensional data using databionics principles can be performed interactively or automatically.
Sistema de vídeo distribuido para Centros Infatiles
Proyecto para la IV Edición del Desafío Tecnológico planteado en la ETSIIT de la Universidad de Granada. Nuestro grupo propone una solución para que padres puedan ver en tiempo real a sus hijos mientras se encuentran Centros Infantiles. Nuestro producto se diferencia de otros en el que el cambio de cámara es automático, realizando para ello una triangulación de los niños.
A specialized innovative cross-platform for reverse engineering PCB's
"ReverseM" is a open-source project initiative aimed at supporting designers,researchers and hobbyists to tinker with electronics creatively. We are creating a software tool and website in spirit of reverse engineering. We are currently developing a tool that allows users to creatively convert the real-world manufactured PCB in to their respective Schematic diagrams and documenting their prototypes. Share the schematics, tinker with it to promote the electronics knowledge among interested persons. Features a) User Friendly interface for quick referencing and converting. b) Schematic View - Shows the circuit which has been converted from real world to virtual world c) PCB View - Lets you design and export the necessary documents for producing a Printed Circuit Board. d) Palette Windows - provide parts, tools and information. e) The Part Creator - a tool to modify parts or create new parts. f) Inbuilt electronic parts database. h) Quick prototyping of printed circuit boards.
This is a Content Based Image Retrieval Interface with only color features implemented. This is part of a thesis work to analyze the different color features and observe the performance on mainly corel5k images.
Simulation for Physics / Bilogics Systems
Supports flow Simulation for Physics and Meso-Compartimental Simulations for Biological Systems. Uses a Container-Flow based System.
matlab 2D image processing GUI toolbox for flow visualization
A general flow visualization Matlab toolbox for image processing of some common planar/surface visualization techniques from PLIF (Planar laser induce fluorescence) for tracer distribution, BOS (background oriented Schlieren) for density, TSLC (Temperature sensitive liquid crystal) for thermal and PSP (Pressure sensitive paint) pressure distribution measurement. This work is part of author's PhD study, under Dr S. Zhong @ the University of Manchester's supervision, guidance and support. Both GUI and command line interface are provided for newbie and advanced user. Image can be processed into contour image, matlab mat and tecplot data. This toolbox can be conveniently extended for 2D image processing in other disciplines, for example, surface stress measurement, inferred thermograph, PIV. See developer guide for HOWTO. * example project.mat and calib.mat use abs path will not work for you directly. pl. rebuild yours according to my youtube tutorial
A Matlab toolbox for interfacing with the pure JAVA numerical library Snifflib. This toolbox provides convenience m-files for interoperability with Snifflib from within an active Matlab session running a JAVA virtual machine.
Image Processing/Tracking Software for off-line analysis of Field Biology Videos/Recordings.
gfit creates an interface between computational models and experimental data and provides tools for their analysis
Desarrollo de software para computo bioinspirado y bioinformatica
Nounou is a Java library for handling optical imaging data. The core consists of a modular stream of "filter blocks" that each modify or display the data. It is easily called from Mathematica and Matlab, for advanced figure output.
The goal of the project is the automatic treatment of an agenda pictures in order to convert it into a digital agenda.
GMTrack is a suite of programs used to simulate, visualize, and analyze Gaussian mixture based tracking algorithms for maneuvering targets in the presence of clutter.
The main goal of this project is to build simple computer image recognition system. This project is part of my B.A. preparations.
This software is a java3d-based grid platform and depends on jvm and matlab.
A tool based on the model proposed by Bellman & Zadeh (1970) fuzzy logic (fuzzy sets) decision support paper. The first version of the application was developed in Java (pure java + jgoodies and some other APIs). Now it is being rewritten using nebular, a pure Java fuzzy API.
The Digital Communication Systems Lib: This library contains digital communucations systems implementations, such as BSPK and MIMO - WOFDM. Various OpenSource Projects: 1. Password/Username/Domain Analyzer
PeterHi is an initiative to provide a set of tools for education based on your existing IT infrastructure.