Framework for Systems Biology
The Systems Biology Workbench(SBW) is a framework for application intercommunications. It uses a broker-based, distributed, message-passing architecture, supports many languages including Java, C++, Perl & Python, and runs under Linux,OSX & Win32. It comes with a large number of modules, encompassing the whole modeling cycle: creating computational models, simulating and analyzing them, visualizing the information, in order to improve the models. All using community standards, such as SED-ML, SBML and MIRIAM.
G4J is a set of API that communicate to GMail. Use this API to login, retrive/search/browse message, download attachment and do others action on GMail account! An email application (Gmailer for java) is included to demonstrate the usage of the API.
A group of Java-based testing tools and JUnit extensions aimed at increasing quality awareness and ease of introduction of testing tools into the development cycle. Examples are Automated documentation, class hierarchy unit testing, and code coverage.
ScriptBot is a scriptable IRC bot. Based on PircBot and BSF, it allows to fully customize the bot's behaviour by editing script files in the scripting language of your choice.
JD3Lib is an id3/mp3 library written in Java. It provides functionality for reading mpeg information such as the bitrate, sample rate, channelmode, etc. It also allows the reading, writing, and removal of id3v1 and id3v2 tags.
LucidDB is a DBMS optimized for business intelligence. Besides architectural innovations such as column-store, it supports many advanced features from SQL:2003, including SQL/MED and user-defined transformations written in Java.
Developing Open Source AntiVirus Solutions
J2EP is a reverse proxy running on a J2EE engine. The proxy is written in java and was originally designed with Tomcat in mind, but any engine should work fine. A set of basic mapping rules are included but they can easily be extended to your own needs.
Hedwig is an open source IMAP, SMTP server written in Java, designed with ease of installation and configuration in mind. Hedwig enables storage of mail message headers in a relational database(MySQL or Oracle) and mail messages in a file system.
Mount mac HFS / HFS+ partitions on windows, as a folder
Mount existing mac hfs/hfs+ partitions on your harddisk as a readonly virtual folder on windows. Requires java 1.6 (32-bit) and pismo file mount ( http://www.pismotechnic.com/download/ ) to be installed. The setup version has java/pismo/jhfsplus all three packed in a single bundle. A convenient free solution to macdrive.
OpenCHAT is a 100% HTTP and HTML based chat server written in Java. It has it´s own stand alone HTTP server integrated and does not need any Applet or special software on client side to run on, but only a frames enabled web browser.
Zapcat endeavours to be a simple to use bridge between the JMX management API inside Java applications and the Zabbix monitoring tool.
!! PJL Compressing Filter is renamed to ziplet and hosted on github now!! See here: https://github.com/ziplet/ziplet A J2EE servlet filter which compresses data written to the response. It supports several algorithms (gzip, deflate, etc.) and emphasizes minimal memory usage and high throughput. Also provides detailed performance stats. Feel free to fork pjl-comp-filter on Github: https://github.com/ziplet/ziplet
A Java implementation of the XML-RPC Specification, with support for dynamic proxies and serialization of arbitrary Java objects.
jHTTPp2 is a very small HTTP/1.1 proxy server written in Java. It offers following features: IPv6 support, high-performance, blocks URL's based on a block-list, removes data from the HTTP-Header, blocks Cookies from untrusted hosts.
JWhoisServer: java whoisserver / java whois server : a small, fast and highly configurable RFC 3912 compliant whois server written in java (platform independent) and using a RDBMS (mysql, postgreSQL, oracle, SQLite3, HSQLDB, JavaDB / Apache Derby, CUBRID, firebird2, H2 Database Engine, ...) as a storage engine.
This site hosts the source code for C++ version of the Broker for SBW, NOM module, advanced simulation suite, analysis applications and model editors.
Pi3Web is a multithreaded, highly configurable multiple platform HTTP 1.0/1.1 web server written in C++. Pi3Web 2.0 supports among other things CGI, FCGI, Win-CGI, SSI, directory indexing, SSL, embedded perl, PHP4, Servlets, JSP and XSLT.
Ozone is a fully featured, object-oriented database management system implemented in Java and distributed under the LGPL open source license. The ozone project aims to evolve a database system that allows developers to build pure object-oriented systems.
Java Application Update Utility System (jauus) is a simple, easy to configure update utility for any language or type of files. It can be configured for remote or network based updates.
JavaSock provides a combination Java API and native code library allowing Java programs to manipulate raw network packets through a consistent and secure interface. The API supports applications including packet filtering and packet sniffing.
Free open-source 100% Java DHCP API suitable for client, server, relay... development. This API is used in the "dhcpd-j" server.
Embeddable telnet daemon written 100% in Java.
The Java Web Translator library provides automatic language translation to the client's locale. Automatic language translation for 14 languages is supported including English, Espańol, Français, Italiano, Deutsch, Greek, Chinese, Japanese, Russian,. .
An e-stim signal generator in java
A signal generator generating signals for e-stim purposes. Planned to support windows, linux, and popular cell phone/tablet systems. Will create pulse trains that are mostly zero-averaged to avoid cell damage, allow certain manipulation options (frequency and amplitude modulation in certain ways). Control will be possible via a Java Swing GUI, and/or a terminal like interface on network or serial lines. Will allow 1-4 channels (2-8 electrodes). Output the signal via a soundcard to an amplifier that can output e-stim compliant signals (100+V, current limited to about 100mA, high impedance, short circuit proof). Care to have a potential free output for every electrode (use separating NF transformers). Author claims no responsibility for physical damage from misuse or routing the signal through unsuitable circuitry. Any use happens at the sole risk of the user.