A file format for exchanging computational models in systems biology
The Systems Biology Markup Language (SBML) is an XML-based description language for representing computational models in systems biology. Visit the project web site to learn more.
Processing and analysis of Small Angle X-ray Scattering (SAXS) data.
BioXTAS RAW is a program for analysis of Small-Angle X-ray Scattering (SAXS) data. The software enables: creation of 1D scattering profiles from 2D detector images, standard data operations such as averaging and subtraction, analysis of radius of gyration (Rg) and molecular weight, and advanced analysis using GNOM and DAMMIF. It also allows easy processing of inline SEC-SAXS data and data deconvolution using the evolving factor analysis (EFA) method. To install: Check the instructions available at: http://bioxtas-raw.readthedocs.io/en/latest/install.html and in the Files tab. User guides: RAW guides are available at: http://bioxtas-raw.readthedocs.io/ and in the Files tab. For requests, comments, and bug reports try our google group: http://bit.ly/rawhelp If that doesn't work, contact: soren (dot) skou (at) saxslab (dot) com and hopkins (dot) jesse (at) gmail (dot) com.
CC Mode is a GNU Emacs and XEmacs mode for editing C and other languages with similar syntax; currently C++, Objective-C, Java, CORBAs IDL, Pike, and AWK. It is a standard package in both GNU Emacs and XEmacs.
BioSig is a software library for processing of biomedical signals (EEG, ECG, etc.) with Matlab, Octave, C/C++ and Python. A standalone signal viewer supporting more than 30 different data formats is also provided.
Moved to GitHub.com/gdraheim/zziplib/ The ZZIPlib provides read access on ZIP-archives. The library uses only the patent-free compression-algorithms supported by Zlib. It provides functions that transparently access files being either real files or zipped files, both with the same filepath
Python package to retrieve and manage data of the IMDb
IMDbPY is a Python package useful to retrieve and manage the data of the IMDb movie database about movies, people, characters and companies. Platform-independent, it can retrieve data from both the IMDb's web server and a local copy of the whole db.
Trusted Boot (tboot) is an open source, pre- kernel/VMM module that uses Intel(R) Trusted Execution Technology (Intel(R) TXT) to perform a measured and verified launch of an OS kernel/VMM. mercurial repo: http://hg.code.sf.net/p/tboot/code.
a Small (Matlab/Octave) Toolbox for Kriging
The STK is a (not so) Small Toolbox for Kriging. Its primary focus in on the interpolation / regression technique known as kriging, which is very closely related to Splines and Radial Basis Functions, and can be interpreted as a non-parametric Bayesian method using a Gaussian Process (GP) prior. The STK also provides tools for the sequential and non-sequential design of experiments. Even though it is, currently, mostly geared towards the Design and Analysis of Computer Experiments (DACE), the STK can be useful for other applications areas (such as Geostatistics, Machine Learning, Non-parametric Regression, etc.).
Develop EFI applications for ARM-64, ARM-32, x86_64, IA-64 (IPF), IA-32 (x86), and MIPS platforms using the GNU toolchain and the EFI development environment.
iWattnick: the ultimate e-bike computer
iWattnick aims to be a top-class computer for e-bikes, e-scooters, e-motorcycles. It is equipped with a large B/W screen, two buttons, accelerometer, magnitometer, current and voltage sensors, light sensor, internal temperature sensor, battery-backed real-time clock, a buzzer and has connection ports for external speed sensor (motor Hall, phase or reed switch), a Bluetooth SPP dongle, up to three temperature sensors (TMP36, LM35, KTY83 etc), cadence sensor, throttle handle, output to controller throttle input. The project includes: The hardware (schematics & drawings) The firmware (microcontroller program) The software (for mobile phones and PC) Project developement is being tracked (in Russian) here: http://electrotransport.ru/ussr/index.php?topic=24226.0
Covered is a Verilog code coverage utility using VCD/LXT/FST dumpfiles (or VPI interface) and the design to generate line, toggle, memory, combinational logic, FSM state/arc and assertion coverage report metrics viewable via GUI or ASCII format.
PySCeS is the Python Simulator of Cellular Systems
PySCeS is the Python Simulator of Cellular Systems. For a network of coupled reactions it does a stoichiometric matrix analysis, calculates the time course and steady state, and does a complete control analysis.
ImageMagick is free software to create, edit, and compose bitmap images in many formats from the commandline or via programming interfaces. Images can be cropped, resized, and combined, effects can be applied, and text, polygons, and curves can be added.
ABC is a text-based music notation language. This project aims to promote the ABC music notation language by providing cross-platform, open-source tools for manipulating, displaying and playing (via MIDI) ABC files.
BCPL was designed by Martin Richards at Cambridge University (1966)
Here you will find a collection of BCPL tools I've gathered from the net, cleaned up and ported to the Atari ST. This involved fixing bugs, reducing stack usage and making the code compile in 16bit via Pure C (Turbo C for the Atari ST). Source credits include: Martin Richards - BCPL Kit http://www.cl.cam.ac.uk/~mr10/ Robert Nordier (Translated interp to C) http://www.nordier.com/ Serge Vakulenko (Translated cg/syn/trn to C) https://github.com/sergev/b I'm sure there are other names, but those are the ones on the source files. The code now compiles clean for the Atari ST, so it should work for anything else.
An information system for cyclists in Berlin and Brandenburg
A bike information system for cyclists in Berlin and Brandenburg (Germany) with a map view and a routing engine. There's a graphical interface (based on Perl/Tk) as well as an Web interface. Source code may be found at Github: https://github.com/eserte/bbbike/
This library is intended to provide a minimal C/C++ API to efficiently create, manipulate, and parse LISP-style symbolic expressions.
Command-line operators for netCDF and HDF files
The netCDF Operators, or NCO, are a suite of file operators which facilitate manipulation and analysis of self-describing data stored in the (freely available) netCDF and HDF formats. Volunteers welcome! See homepage for details and download links.
medSLT - The Medical Speech Translator
The fastest and easiest way to detect mobile devices
Apache Mobile Filter is the easiest and fastest way to detect mobile devices. AMF is a suite of tools that allow access to a Device Repository (such as WURFL, DetectRight, 51Degrees.mobi or the free AMF service) directly from Apache: now you can detect devices no matter what language your website uses.
SLEEF stands for SIMD Library for Evaluating Elementary Functions. SLEEF implements vectorized versions of all C99 math functions, that utilize SIMD instructions of modern processors to make computation more efficient. The library also includes vectorized DFT subroutines.
CLISP is a portable ANSI Common Lisp implementation and development environment by Bruno Haible. Interpreter, compiler, debugger, CLOS, MOP, FFI, Unicode, sockets, CLX. UI in English, German, French, Spanish, Dutch, Russian, and Danish.
Electronical interlocking system for modular model railroad layouts.
This is the EPP (Extensible Provisioning Protocol) Registry/Registrar Toolkit. It is used by domain name registrars that wish to communicate with EPP domain name registries (eg. .info, .name, .pro, .biz).
PlanetaMessenger.org is a Instant Messenger with support to all well known instant messenger networks including ICQ,MSN,AIM,Yahoo! and Jabber through a powerfull plugin engine. PlanetaMessenger.org support multiples look and feels, plugins and profiles.