BWA is a program for aligning sequencing reads against a large reference genome (e.g. human genome). It has two major components, one for read shorter than 150bp and the other for longer reads.
FLAC is a free lossless compressed audio format which supports streaming and archival. The FLAC project maintains the format and provides a reference encoder/decoder and input plugins for several popular audio players.
ReadyMedia (formerly known as MiniDLNA) is a simple media server software, with the aim of being fully compliant with DLNA/UPnP-AV clients. It is developed by a NETGEAR employee for the ReadyNAS product line. It is not in any way endorsed by the Digital Living Network Alliance®.
Complete solution for HDR photography
Luminance HDR is a complete suite for HDR imaging workflow. It provides a wide range of functionalities, during both the fusion stage and the tonemapping stage. Its graphical user interface, based on Qt5, runs on a variety of platforms, such as Microsoft Windows, Mac OS X 10.9 and later and several Unix flavors (Linux, FreeBSD and others). Input images can be supplied in multiple formats, from JPEG to RAW files. In the same way, output can be saved in many different formats as well, from JPEG to TIFF (both 8 bit and 16 bit per channel), enabling all the power of your post processing tools.
Allows editing of any size file in hexadecimal, decimal and ASCII. A great tool that allows you to edit and analyze the contents for either the data or resource fork of any type of file. 68K, PPC and Carbon run on MacOS 7-9 and X.
PDF transformation/manipulation program + library
QPDF is a C++ library and set of programs that inspect and manipulate the structure of PDF files. It can encrypt and linearize files, expose the internals of a PDF file, and do many other operations useful to end users and PDF developers.
A barcode encoding library supporting over 50 symbologies.
Encodes data into any of the following: Australia Post barcode, Aztec Code, Aztec Runes, Channel Code, Codabar, Codablock-F, Code 11, Code 128, Code 16K, Code 2 of 5 (Including IATA, Datalogic, ITF14, Deutsche Post Leitcode and Identcode), Code 32 (Italian Pharmacode), Code 39, Code 39+, Code 49, Code 93, Code One, Data Matrix (ECC200), DotCode, Dutch Post KIX, EAN, Grid Matrix, GS-1 DataBar, Han Xin Code, HIBC, Japan Post, Korea Post, LOGMARS, MaxiCode, MSI, PDF417 and Micro PDF417, Pharmacode, POSTNET, PLANET, QR Code and Micro QR, Royal Mail 4-state (RM4SCC) and Mailmark, Telepen, UPC-A and UPC-E, UPNQR and USPS Intelligent Mail. Also supports full range of Unicode (UTF8) input using automated ECI switching for encoding in multiple languages and GS-1 data input mode. Save to PNG, BMP, TIF, GIF, PCX, SVG, WMF and EPS output file formats. Includes CLI and GUI interfaces and fully documented API for integrating with other projects.
The rpcbind utility is a server that converts RPC program numbers into universal addresses.: The upstream git tree is at: git://linux-nfs.org/~steved/rpcbind
Openfiler is a browser-based network storage management utility. Linux-powered, Openfiler delivers file-based Network Attached Storage (NAS) and block-based SAN in a single framework. It supports CIFS, NFS, HTTP/DAV, FTP, and iSCSI.
Scanning probe microscopy data visualisation and analysis
A data visualization and processing tool for scanning probe microscopy (SPM, i.e. AFM, STM, MFM, SNOM/NSOM, ...) and profilometry data, useful also for general image and 2D data analysis.
32/64 bit multi-platform Ethernet S7 PLC communication suite
Snap7, through three specialized components: Client and the inedited Server and Partner, allows you to definitively integrate your PC based systems into a PLC automation chain. Designed to transfer large amounts of hi-speed data in industrial facilities, it scales easily, down to small Linux Arm boards such as Raspberry PI. Hi level object oriented wrappers are provided, currently C/C++, .NET/Mono, Pascal, LabVIEW, Python with many source code examples. Very easy to use, a full working server example is not bigger than the “Hello world”. Many projects/makefiles are ready to run to easily rebuild Snap7 in any platform without the need of be a C++ guru. Very detailed documentation provided.
The Lightweight Java Game Library (LWJGL) is a solution aimed directly at professional and amateur Java programmers alike to enable commercial quality games to be written in Java. LWJGL provides developers access to high performance crossplatform libraries such as OpenGL (Open Graphics Library), OpenCL (Open Computing Language) and OpenAL (Open Audio Library) allowing for state of the art 3D games and 3D sound. Additionally LWJGL provides access to controllers such as Gamepads, Steering wheel and Joysticks. All in a simple and straight forward API. LWJGL is available under a BSD license, which means it's open source and freely available at no charge.
The Open On-Chip Debugger
The "Open On-Chip Debugger" provides JTAG/SWD access from GDB (or directly with TCL scripts) to processors with ARM and MIPS based cores. See website for full list of supported targets.
Command line tool for managing Amazon S3 and CloudFront services
Open-source tool to access Amazon S3 file storage. S3cmd is a free command line tool and client for uploading, retrieving and managing data in Amazon S3 and other cloud storage service providers that use the S3 protocol, such as Google Cloud Storage. Lots of features and options have been added to s3cmd since its very first release in 2008.... we recently counted more than 60 command line options, including multipart uploads, encryption, incremental backup, s3 sync, ACL and Metadata management, S3 bucket size, bucket policies, and more!
The Pure Data (short Pd) project on SourceForge unifies the extensions (or externals) written for the Pure Data Graphical Computer Music System written by Miller Puckette with contributions from many others.
Linux Educacional is a Linux distribution aimed for use in public schools in Brazil.
Linux System Optimizer and Monitoring
Linux System Optimizer and Monitoring Github Repository: https://github.com/oguzhaninan/Stacer
Development toolkit for Web Services and XML data bindings for C & C++
The gSOAP toolkit is an extensive suite of portable C and C++ software to develop XML Web services with powerful type-safe XML data bindings. Easy-to-use code-generator tools allow you to directly integrate XML data in C and C++ (and C++11/C++14). Serializes native application data in XML. Includes WSDL/XSD schema binding and auto-coding tools, stub/skeleton compiler, Web server integration with Apache module and IIS extension, high-performance XML processing with schema validation, fast MIME/MTOM streaming, SOAP and REST (WCF compatible), WS-* protocols (WS-Security, WS-Policy, WS-ReliableMessaging, etc), XML-RPC and JSON. Licensed under GPLv2. Commercial licensing and technical support options are available: visit the project web site.
Dual-target(32 & 64-bit) MinGW-W64 compilers for 32 and 64-bit windows
Projects joined MinGW-W64, and the new builds will be available on the MinGW-W64(https://sourceforge.net/projects/mingw-w64) site.
PyMOL is an OpenGL based molecular visualization system
PyMOL is a Python-enhanced molecular graphics tool. It excels at 3D visualization of proteins, small molecules, density, surfaces, and trajectories. It also includes molecular editing, ray tracing, and movies. Open Source PyMOL is free to everyone!
Ettercap is a multipurpose sniffer/interceptor/logger for switched LAN. It supports active and passive dissection of many protocols (even ciphered ones) and includes many feature for network and host analysis. Development has been moved to GitHub, https://github.com/Ettercap/ettercap
The pinnacle of file-sharing and chat - an innovative DC client!
ApexDC™ is an innovative Direct Connect client based on the DC++ and StrongDC++ projects. Direct Connect provides a rare blend of seamless file sharing and community based chat and messaging between users. ApexDC features plugins and scripting through Lua and much more. Both operators and users alike should find it a pleasant experience. Note: as of May 28th 2016 ApexDC is now primarily distributed as two separate installers one targetting 32bit and the other 64bit operating systems. Additionally XP compatible binaries are now only offered as a separate download from the files section.
This project is a random collection of Linux kernel-related projects and source code.
MPlayer Mencoder FFmpeg native win32/win64 builds
Binary builds of MPlayer/MEncoder for win32/win64, FFmpeg MinGW related packages and MinGW-w64 toolchains
Entrain your brain!
A programmable audio generator intended as an aural aid to meditation, implementing the binaural beat principle as described in Gerald Oster's Oct. 1973 Scientific American article "Auditory Beats in the Brain."