Search Results for "genome"
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Showing 1 open source project for "genome"
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Genome Information Entropy Spectrum
A code that computes information entropy spectrum of any genome.
We request users of this software to please kindly cite this article: Melvin M. Vopson, Samuel C. Robson, A new method to study genome mutations using the information entropy, Physica A: Statistical Mechanics and its Applications, Volume 584, 126383 (2021) https://doi.org/10.1016/j.physa.2021.126383 The GENIES program is a stand alone code, with an easy to use graphical interface that performs the following tasks: a) it loads up two genome files (original and mutated); b) it computes the information entropy spectrum of each genome; c) it computes the information entropy ratio spectrum; d) it extracts the number of mutations identified, their index location and then it saves all the data including the spectra; e) in addition, the program performs a base point to base point comparison of the two genomes to detect the mutations via direct comparison. ...
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