Showing 2 open source projects for "data base"

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    Genome Information Entropy Spectrum

    A code that computes information entropy spectrum of any genome.

    ...Robson, A new method to study genome mutations using the information entropy, Physica A: Statistical Mechanics and its Applications, Volume 584, 126383 (2021) https://doi.org/10.1016/j.physa.2021.126383 The GENIES program is a stand alone code, with an easy to use graphical interface that performs the following tasks: a) it loads up two genome files (original and mutated); b) it computes the information entropy spectrum of each genome; c) it computes the information entropy ratio spectrum; d) it extracts the number of mutations identified, their index location and then it saves all the data including the spectra; e) in addition, the program performs a base point to base point comparison of the two genomes to detect the mutations via direct comparison. The function e) is very important to check the proposed methodology and to facilitate its calibration for predictions of fut
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    Nanopuller

    Nanopuller

    AFM puller control software

    Nanopuller by Konrad Pawlak and Janusz Strzelecki http://dx.doi.org/10.1016/j.ultramic.2016.01.008 http://www.biofizyka.fizyka.umk.pl/ Laboratory made AFM force spectroscopy setups were present in milestone single molecule experiments and there is a growing number of groups using such equipment even though the commercial setups are nowadays widely available. The ability to tailor the setup accordingly to particular application is an advantage that makes the effort necessary for...
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