Search Results for "annotation"
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Showing 34 open source projects for "annotation"
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Cowart
Local infinite canvas plugin for Codex
...Cowart enables Codex to interact with the canvas through MCP tools that can read selections, insert generated images, and manage local assets. Users can create AI image holders on the canvas and have Codex automatically generate images that match the selected frame and aspect ratio. It also supports annotation-driven image refinement, allowing users to mark up screenshots and generate clean revised versions while preserving the original artwork. The result is a collaborative environment that combines vis -
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babel-plugin-styled-components
Improve the debugging experience and add server-side rendering support
This plugin is a highly recommended supplement to the base styled-components library, offering some useful features. Consistently hashed component classNames between environments (a must for server-side rendering). Better debugging through automatic annotation of your styled components based on their context in the file system, etc. Various types of minification for styles and the tagged template literals styled components uses. -
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Screenity
The most powerful screen recorder & annotation tool for Chrome
Screenity is a feature-packed screen and camera recorder for Chrome. Annotate your screen to give feedback, emphasize your clicks, edit your recording, and much more. Make unlimited recordings of your tab, desktop, any application, and camera. Annotate by drawing anywhere on the screen, adding text, and creating arrows. Highlight your clicks, focus on your mouse, or hide it from the recording. Individual microphone and computer audio controls, push to talk, and more. Custom countdowns, show... -
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RePen
A free screen annotation tool for Windows
RePen is a free, open-source screen annotation overlay for Windows 10/11. It allows teachers, presenters, tutorial creators, and remote teams to write, draw, highlight, and zoom directly on top of any active desktop application, PowerPoint slide, PDF, or video. Key Features: • Advanced Brushes: Standard Pen, Calligraphy brush, Highlighter, and fading Laser pointer. • Presentation Focus Tools: Real-time Spotlight and screen Magnifier -
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miRge3
Comprehensive analysis of small RNA sequencing data
An update to Python package to perform comprehensive analysis of small RNA sequencing data, including miRNA annotation, A-to-I editing, novel miRNA detection, isomiR analysis, visualization through IGV, processing Unique Molecular Identifieres (UMI), tRF detection and producing interactive graphical output. miRge3.0 is developed in python v3.8 and is a recent update of our previous version miRge2.0. This build includes command line interface (CLI) and cross-platform Graphical User Interface (GUI). ... -
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beCPG PLM (Product Lifecycle Management)
New Product Development, Projects and Quality management
beCPG is an open source Product Lifecycle Management (PLM) software that manages the entire lifecycle of a product from its conception, through design and manufacture, to service and disposal. beCPG permits you to work on products and projects with customers and suppliers. beCPG is ready to use for the CPG industries such as Food & Beverage and Cosmetics. We differentiate ourselves from the competitors with a comprehensive and user-friendly software offered at a competitive price. In... -
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Recogito JS
A JavaScript library for text annotation
A JavaScript library for text annotation. Use it to add annotation functionality to a web page, or as a toolbox for building your own, completely custom annotation apps. Try the online demo or see the API reference. -
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MITRE Annotation Toolkit
A toolkit for managing and manipulating text annotations
The MITRE Annotation Toolkit (MAT) is a suite of tools which can be used for automated and human tagging of annotations. Annotation is a process, used mostly by researchers in natural language processing, of enhancing documents with information about the various phrase types the documents contain. MAT supports both UI interaction and command-line interaction, and provides various levels of control over the overall annotation process. -
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Annotating the Web
to easily add annotation functionality to any webpage
Select the text of the webpage and click the end of the selection to highlight and add your own annotation or notes. -
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The Phenoscape project attempts to formalize the description of evolutionary characters to make them interoperable and computable with the body of phenotype annotation being generated by model organism databases, and other biomedical research.
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MetaErg
Metagenome Annotation Pipeline
MetaErg is a stand-alone and fully automated metagenome and metaproteome annotation pipeline published at: https://www.frontiersin.org/articles/10.3389/fgene.2019.00999/full. If you are using this pipeline for your work, please cite: Dong X and Strous M (2019) An Integrated Pipeline for Annotation and Visualization of Metagenomic Contigs. Front. Genet. 10:999. doi: 10.3389/fgene.2019.00999 The instructions on configuring and running the MetaErg pipeline is available at GitHub repository: https://github.com/xiaoli-dong/metaerg -
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BioRec:Bird Census field data annotation
Recognizing biological data from a notebook.
This project helps to digitize field data for a certain Bird Census method. Namely, bird census based on personal inspection or small (~10 km^2) regions with recording birds' position and behaviour on paper. This project makes it easy to annotate such field data and to make this data available for statistical analysis. -
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Jigy Generator OSX
The best way to generate a Spring Java Web Application. It just works!
The Jigy Generator is the simplest way to build and code a Java web application with a Spring Framework by using a project creation wizard and now it's been made even simpler by downloading a very small HTML file (337 bytes) and filling out a few form fields and let it construct your project with ease! The resulting project will be a Java web application with a Spring Framework configured to run in Eclipse or Netbeans. The project is annotation-based and provides dependency injection of project resources and simple annotation-based transaction management. Your created project will be already configured to connect to your project's database and to return JSON responses when required. Also the login and file upload modules will be fully functional immediately upon project creation. ... -
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Jigy Generator Linux
The best way to generate a Spring Java Web Application. It just works!
The Jigy Generator is the simplest way to build and code a Java web application with a Spring Framework by using a project creation wizard and now it's been made even simpler by downloading a very small HTML file (337 bytes) and filling out a few form fields and let it construct your project with ease! The resulting project will be a Java web application with a Spring Framework configured to run in Eclipse or Netbeans. The project is annotation-based and provides dependency injection of project resources and simple annotation-based transaction management. Your created project will be already configured to connect to your project's database and to return JSON responses when required. Also the login and file upload modules will be fully functional immediately upon project creation. ... -
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Jigy Generator Windows
The best way to generate a Spring Java Web Application. It just works!
The Jigy Generator is the simplest way to build and code a Java web application with a Spring Framework by using a project creation wizard and now it's been made even simpler by downloading a very small HTML file (337 bytes) and filling out a few form fields and let it construct your project with ease! The resulting project will be a Java web application with a Spring Framework configured to run in Eclipse or Netbeans. The project is annotation-based and provides dependency injection of project resources and simple annotation-based transaction management. Your created project will be already configured to connect to your project's database and to return JSON responses when required. Also the login and file upload modules will be fully functional immediately upon project creation. ... -
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pyMantis is a data-management system for (systems) biology build on the web2py framework. It features: tree based file explorer, relational db table wizzard with automated creation of user interfaces, internal and external access management, wiki, ..
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Dasty is a web client for visualizing protein sequence feature information using DAS, the Distributed Annotation System.
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Xi Spectrum Viewer
Mass Spectrum Viewer Tool
To overcome current limitations in published MS data accessibility, we introduce a browser-based spectrum viewer that aims to allow exploration of alternative interpretations for MS spectra and additionally: can be operated by non-specialists, is open source, can be integrated into other software, gives appropriate publication-quality output. Spectrum Viewer is implemented totally on the client side using XHTML for menus and dialogs, SVG for spectrum and peptide display, and Javascript to... -
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Web Annotation with Fragment Ids
Web Annotation - Mark, Comment, Share
This Projects aims to create a server-client architecture to make annotation of web elements not only possible, but easy to use. The idea for this project has its roots within a practical software study for the module software Engeneering of the Unisversity of Leipzig, Germany. Under the given liscence we want for everyone interested in supporting or further development to do so. For usage and installation see our [Wiki]. -
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BoulderALE is an RNA alignment editor, which allows for the annotation of basepairs, annotation and collapsing of features (horizontal) and sequences (vertical), along with 2D display of sequences and base composition given a secondary structure.
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OSCAR (Open Source Chemistry Analysis Routines) is software for the semantic annotation of chemistry papers. The modules OPSIN (a name to structure converter) and ChemTok (a tokeniser for chemical text) are also available as standalone libraries.
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Joomla! component to achieve a semantic extensión of the WCMS It converts the infrastructure of Joomla! into the semantically equivalent. It allows both manual and automatic semantic annotations as well as enhanced search capabilities.
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A database of linguistic annotation of medical text (from MEDLINE), including corpora used with ABGene, BioCreative I and II, and the MedPost training corpus.
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GWTApp provides several features like: HTML templating and messaging at runtime without application recompiling, MetaField to auto bind and simulate annotation of RPC data fields, Strong typing in MVC, Modular structure in Maven.
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J2J provides an intuitive way to convert Java to JSON and JSON to Java. Annotate any Java class then use JsonWriter to emit JSON from java or JsonReader to convert JSON to java objects. (source code and tutorial included) Version 2.0 in development.