Search Results for "stem"
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Showing 12 open source projects for "stem"
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AngClust
AngClust: Angle-based feature clustering for time series
... * We defined three indicators to identify significant clusters: (i) the fluctuation degree of expression levels, (ii) homogeneity, and (iii) the degree of clustering while the clusters are functionally significant. * The clustering outcome of our algorithm (AngClust) is better than the currently most popular STEM algorithm. * AngClust can be used to analyze any short time series gene expression profiles. -
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Arduino
Open-source electronics platform
...The boards can be assembled by hand or purchased preassembled. Arduino is a popular tool for IoT product development as well as one of the most successful tools for STEM/STEAM education. Hundreds of thousands of designers, engineers, students, developers and makers around the world are using Arduino to innovate in music, games, toys, smart homes, farming, autonomous vehicles, and more. Arduino is the first widespread Open Source Hardware project and was set up to build a community that could help spread the use of the tool and benefit from contributions from hundreds of people who helped debug the code, write examples, create tutorials, etc. -
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Korean Analyzer Rhino
Parsing Korean words by morpheme and part-of-speech
RHINO parses Korean words by morpheme and part-of-speech. Its dictionaries are based on Korean Modern Tagged Corpus(12 million phrases scale) which was made by Korean government. So it analyses many cases of stems and endings. And the newly developed Dynamic Dictionary Technology can make words to react with their context. That is, a programmed database. For more information see the files in the help folder. -
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LoopMatcher
Find sequence-specific stem-loops in FASTA and GenBank files.
LoopMatcher is a bioinformatics tool that searches for hairpin structures in cDNA / mRNA sequences (in FASTA, GenBank or Vienna format) with specific consensus sequences in the loop. It uses RNAfold to predict sequence structure and UShuffle to generate random sequences with a defined k nucleotide frequency. Also, sequences in GenBank format can be downloaded directly from NCBI using the NCBI access ID. Requirements JAVA Runtime 8. It's highly recommended to have a multicore processor... -
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MSqBAT
Label-free protein quantification for LC-MS
MSqBAT is a freely-available all-platform software application for label-free quantification of proteins from LS-MS data. It was developed in the lab of Dr. Christoph Rösli at the Heidelberg Institude for Stem Cells and Experimental Medicine (HI-STEM) and the German Cancer Research Center (DKFZ). It’s main features are 1) Label-free, MS1-based quantification 2) Support both LC-MALDI-MS- as well as LC-ESI-MS data 3) Supports both GeLC-MALDI-MS- and GeLC-ESI-MS data 4) Convenient, graphical user interface Acknowledgements The development of MSqBAT is kindly supported by YourKit Java Profiler. -
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Stemmer Gujarati
Offline stemmer for Gujarati , which is one of 22 Indian languages.
...It takes input file of type .txt containing Gujarati text encoded as UTF-8 and then removes stop words which are unessential. After processing rest of the words, it outputs corresponding file containing all stem words plus other details. -
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Studying stem cells in cancer
Code for "Microenvironmental variables need to effect intrinsic phenot
Code for "Microenvironmental variables need to effect intrinsic phenotypic parameters of cancer stem cells to affect tumourigenicity" -
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BuckTagger
User-assisted tool for Arabic stem entry to Buckwalter Morpho Analyzer
Using rules written in a Drools decision table, BuckTagger determines the correct Buckwalter Tag based on morphological properties of the input, automatically extracted or given by the user. At the moment, BuckTagger is not complete; it can only handle input that is: - Uninflected - In lexical form, i.e., no clitics or affixes. - A Perfect or Imperfect Verb - Preferably the first and before-last letters are diacritized/vocalized. The interface is in Arabic. See the README for... -
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JAVA Arabic Stemmer
A JAVA class with a small functionality that is stemming Arabic words
A JAVA Arabic stemmer that is based on Shereen Khoja algorithm. This java class offers a function called stemWrod which takes an arabic word and return the stem of it. -
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Simple Task Execution Manager (STEM) is an OSGi UPnP service that generates events and/or performs actions on UPnP devices and services, when a set of conditions on available UPnP services or devices is evaluated true.
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The National STEM Distributed Learning (NSDL) program is a national network dedicated to advancing STEM teaching and learning for all learners in both formal and informal settings.
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Porter Stemmer
Java version of Porter's Stemming algorithm
The Stemmer class transforms a word into its root form. The input word is provided from the add() methods. The stem() method will return the stem as will toString() after stem() has been called). The clear() method will wipe the Stemmer buffer and allow a new word to be input. This version extends Martin Porter's original stemming algorithm by allowing capital letters to exist in words. This version should also be plugged in wherever the old algorithm is used with few accommodations necessary. ...
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