Please cite: An, J., Lai, J., Lehman, M.L. and Nelson, C.C. (2013) miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data. Nucleic Acids Res, 41, 727-737.
We will create index for you if you tell us your interested species (j.an@qut.edu.au).
download command line version "MDS_command_line_Vxx.zip" clicking "Browse All Files"
please find miRPlant in sourceforge for plant miRNA prediction.