Search Results for "pdb file"

DBConvert is a cross converter for HanDBase-, List-, JFile-, MobileDB-, PilotDB-, MariaDB-, MySQL-, PostgreSQL-, SQLite-, MS-Access-, SQL Server-, Firebird- , DBase- and Foxpro- databases, as well as MS-Excel and Calc spreadsheets, CSV- , JSON-, vCard-, hCard-, jCard-, xCard-, YAML- and XML files. Source files: https://github.com/TvBreukelen/fnpdbservices

...Jmol/JSmol is a molecular viewer for 3D chemical structures that runs in four independent modes: an HTML5-only web application utilizing jQuery, a Java applet, a stand-alone Java program (Jmol.jar), and a "headless" server-side component (JmolData.jar). Jmol can read many file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other quantum chemistry programs. Files can be transferred directly from several databases, including RCSB, EDS, NCI, PubChem, and MaterialsProject. Multiple files can be loaded and compared. ...

Timer for speech and debate competitions. Keeps track of speech order, time limits, and prep time for various debate formats (Policy, LD, Parliamentary, Public Forum, etc.) and individual events. Gives verbal and visual time signals.

CoolReader is fast and small cross-platform XML/CSS based eBook reader for desktops and handheld devices. Supported formats: FB2, TXT, RTF, DOC, TCR, HTML, EPUB, CHM, PDB, MOBI. Platforms: Win32, Linux, Android. Ported on some eInk based devices.

A set of java programs that extract coordinate and chemical information from PDB files. The binding site regions are extracted using grid based scheme. For binding site, spatio-chemical descriptor is generated based on PocketMatch algorithm of Dr. Kalidas (author of this project too).

NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/

From a pdb file, the java program calculates the van der Walls surface of the protein in the file.

User friendly PDB (Protein Data Bank) file editor with graphic user interface for protein crystallographers to expedite selective parallel edit / data extraction / analysis of their PDB files

This is the original (Windows/PalmOS) and UNSUPPORTED version of DataDyne's EpiSurveyor mobile data collection software. EpiSurveyor has changed its name to Magpi, and you can register for a free Magpi account at www.magpi.com

jpalm is an api for manipulating PalmDB and MobileDB files in Java.

btp2p stands for Bluetooth p2p and it is a collection of java classes for p2p networks over Bluetooth. Useful for CLDC multiplayer games and other applications with extendable design for layered protocols. HuNt is a chatroom midlet based on btp2p.

The simple converter form Fiction Book files (www.fictionbook.org) to Palm ZText pdb format.

Educational software for learning vocabulary and conjugation in any european languages. Conjugation is implemented via xml rules, vocabulary can be loaded from text files.

π - PI is a Process Improvement system. It encompasses Asset, Metrics, Problem, Issue, Change and Knowledge management into a cohesive application.

An Offline Webpage Viewer to be used with multiple devices including PalmOS, PocketPC, Symbian OS, J2ME enabled mobiles and Sun Java supported platforms (etc. Windows,Linux,Unix,MacOS). It uses the Plucker format for saving data. Its code is based on the

This project provides software resources for creating solid models of proteins that can be printed on color 3D printers. The main focus is a java program that reads in a PDB file and produces a PLY format stick representation of the protein.

A Mini database system written in java/superwaba, to store data aproach to other table-based database systems using Catalogs.