Search Results for "markov"

JAGS is Just Another Gibbs Sampler. It is a program for the statistical analysis of Bayesian hierarchical models by Markov Chain Monte Carlo.

Java Modelling Tools is a suite of scientific tools for performance analysis and modelling using queueing theory and colored stochastic Petri nets. Models are solved either with analytical, asymptotic or simulation methods; workload characterization tools are also included in the suite. See the project website for more details: http://jmt.sf.net

UnBBayes is a probabilistic network framework written in Java. It has both a GUI and an API with inference, sampling, learning and evaluation. It supports Bayesian networks, influence diagrams, MSBN, OOBN, HBN, MEBN/PR-OWL, PRM, structure, parameter and incremental learning. Please, visit our wiki (https://sourceforge.net/p/unbbayes/wiki/Home/) for more information. Check out the license section (https://sourceforge.net/p/unbbayes/wiki/License/) for our licensing policy.

Visual Figaro is an integrated environment to develop component libraries for the dependability modeling tool KB3 used by EDF (http://www.edf.fr/recherche/codes-de-calcul/kb3). KB3 is based on the FIGARO reliability modeling language, suitable for describing CTMC (continuous time Markov chains), DES (discrete event simulation) models, and for automatic generation of fault trees. FIGARO is objet oriented, close to natural language and enables building libraries of reusable components (knowledge bases). Go to "Files" tab to download various Figaro based tools (Visual Figaro, KB3, YAMS), lots of examples and documentation.

VISIT THIS PAGE AS MORE FEATURES ARE BEING ADDED. If you have downloaded 2.03 or above - Use Help>Check Updates to download latest version. If that does not update: Download CMGUpdater from here: update/CMGUpdater.jar Copy it to the update/ folder of your JRaaga installation path. Try again Help>Check for updates. If it does not work. Delete existing installation. Download the latest version and try. Carnatic Music Guru is a tutor/player/lesson generator. YOU NEED Java Runtime...

...Currently, it includes the software systems KReator and MECore and the library Log4KR: - KReator is an integrated development environment (IDE) for relational probabilistic knowledge representation languages such as Bayesian Logic Programs (BLPs), Markov Logic Networks (MLNs), Relational Maximum Entropy (RME), First-Order Probabilistic Conditional Logic (FO-PCL), and others. - MECore is a shell-based system that allows the user to create propositional knowledge bases, to perform a variety of belief change operations, and to query a knowledge base with respect to the principle of optimum entropy...

Logi (Local Observations to Global Integration) transforms several local coordinate systems (composed of polar measurements) into a global spatial uniform network with respect to the Guide to the Expression of Uncertainty in Measurement (GUM).

The software annotates text with 41 broad semantic categories (Wordnet supersenses) for both nouns and verbs; i.e., it performs both sense disambiguation and named-entity recognition. The tagger implements a discriminatively-trained Hidden Markov Model.

HYDRA is an open-source, platform-neutral library for performing Markov Chain Monte Carlo. It implements the logic of standard MCMC samplers within a framework designed to be easy to use and to extend while allowing integration with other software to

This project provides an implementation of duration high-order hidden Markov model (DHO-HMM) in Java. It is compactible with JDK 5 & 6. It was used in the author's research on speech recognition of Mandarin digits. There are some Chinese words in this project and I am afraid that I don't have enough time to translate to English recently.

JProGraM (PRObabilistic GRAphical Models in Java) is a statistical machine learning library. It supports statistical modeling and data analysis along three main directions: (1) probabilistic graphical models (Bayesian networks, Markov random fields, dependency networks, hybrid random fields); (2) parametric, semiparametric, and nonparametric density estimation (Gaussian models, nonparanormal estimators, Parzen windows, Nadaraya-Watson estimator); (3) generative models for random networks (small-world, scale-free, exponential random graphs, Fiedler random fields), subgraph sampling algorithms (random walk, snowball, etc.), and spectral decomposition.

...Consequently, it offers a good way of applying the Conditioned Hidden Markov Model in various tasks, e.g., for scientific or teaching purposes.

EvoPromoter is a JAVA application that detects promoter regions in aligned nucleotide sequences using phylogenetic hidden markov models.

This Java software implements Profile Hidden Markov Models (PHMMs) for protein classification for the WEKA workbench. Standard PHMMs and newly introduced binary PHMMs are used. In addition the software allows propositionalisation of PHMMs.

Data mining tool for sequences (e.g. trajectories on a map, visited web pages, etc.) that creates a succinct description of the sequences, given a taxonomy (e.g. regions and sub-regions in the map, categories and sub-categories of pages, etc.).

D-finder is a bioinformatic search algorithm for the identification of D-sites in JNK interacting proteins. The algorithm is a combination of pattern matching and a hidden markov model (HMM) based on a training set of known JNK D-sites.

Software package for building, training and scoring hidden Markov models (HMMs).

Conrad is both a high performance Conditional Random Field engine which can be applied to a variety of machine learning problems and a specific set of models for gene prediction using semi-Markov CRFs.

Algorithms to estimate the number of k-colorings of a low-degree graph using samplings from a markov chain are provided.

Markov interpreter is an interpreter for "Markov algorithm". It parses a file containing markov production rules, applies it on a string and gives the output.

HmmSDK is a hidden Markov model (HMM) software development kit written in Java. It consists of core library of HMM functions (Forward-backward, Viterbi, and Baum-Welch algorithms) and toolkits for application development.

UGLi ML: The Undirected Graphical Library for Machine Learning. Easy, agile learning and inference from structured/relational data using Markov Networks and Conditional Random Fields.

Simple editor and analyzer of Petri nets. It allows you to build reachability tree with/without instant transitions and Markov chains. It is also possible to set transition distributions and set all the parameters of the current distribution. This project was made as a course project at NTUU "KPI" during attending classes "Computer modelling". Feel free to make any changes to the current version or ask me if you have any question.

Two Markov-Chain-Monte-Carlo-algorithms ("Glauber Dynamics" and "Flip Dynamics") used for randomly sampling k-colorings of a graph.