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Please cite: An, J., Lai, J., Lehman, M.L. and Nelson, C.C. (2013) miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data. Nucleic Acids Res, 41, 727-737.
We will create index for you if you tell us your interested species (j.an@qut.edu.au).
download command line version "MDS_command_line_Vxx.zip" clicking "Browse All Files"
please find miRPlant in sourceforge for plant miRNA prediction.
Windows binaries for the GNU Linear Programming Kit (GLPK)
GLPK 4.65 (GNU Linear Programming Kit, http://www.gnu.org/software/glpk/) is a solver for large-scale linear programming (LP), and mixed integer programming (MIP). This project supplies the most recent Windows executables - 2018-03-17.
Linux and OSX users should download the source distribution from http://ftp.gnu.org/gnu/glpk
KeplerDB is a temporal database to store time/value entries where the type of value could be integer, float/double, boolean and string. KeplerDB is dedicated to be scalable and to create clusters of server allowing the user to analyse and store massing amount of data to monitor systems like computers, clusters, building and captors or financial systems like markets and accounts. The user can use KeplerDB to make data analysis on enormous amount of data (statistics and modelling).
LargeMask provides a class handling masks larger than typical integer type of the underlying OS. It offers higher performance of searching elements in a list than navigating through the whole list.