Search Results for "epigenetics"

...Most genomic sites are represented by short, degenerated motifs with a scattered distribution and sometimes with biological function (ex: regulation of gene expression, splicing patterns or epigenetics signals). These motifs are associated with a huge amount of noise and thus, the development of a computational platform for accurate detection of genomic sites requires the integration of various large-scale biological data in order to filter out false positives. PARSEC represents an intuitive, modular (easily extensible) and all-in-one solution for the efficient integration of lots of diverse genomic information in order to perform nonlinear localization and characterization of biological sites in a user-friendly environment. ...

PDMGE is a software developed for predicting CpG loci and genomic region methylation status. The software is based on Weka project,which extends WEKA to promoter the development of epigenetics. Users should prepare genomic and epigenomic features.