Search Results for "clustering"
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Showing 246 open source projects for "clustering"
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...Quartz can be used to create simple or complex schedules for executing tens, hundreds, or even tens-of-thousands of jobs; jobs whose tasks are defined as standard Java components that may execute virtually anything you may program them to do. The Quartz Scheduler includes many enterprise-class features, such as support for JTA transactions and clustering.
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Infinispan
Infinispan is an open source data grid platform
Infinispan is a distributed in-memory data grid and caching system designed for high-performance computing. It allows applications to scale dynamically by distributing data across multiple nodes, reducing latency and improving resilience. -
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Elasticsearch
A Distributed RESTful Search Engine
Elasticsearch is a distributed, RESTful search and analytics engine that lets you store, search and analyze with ease at scale. It lets you perform and combine many types of searches; it scales seamlessly, and offers answers incredibly fast with search results you can rank based on a variety of factors. Elasticsearch can be used for a wide variety of use cases, from maps and metrics to site search and workplace search, and with all data types. -
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Smile
Statistical machine intelligence and learning engine
Smile is a fast and comprehensive machine learning engine. With advanced data structures and algorithms, Smile delivers the state-of-art performance. Compared to this third-party benchmark, Smile outperforms R, Python, Spark, H2O, xgboost significantly. Smile is a couple of times faster than the closest competitor. The memory usage is also very efficient. If we can train advanced machine learning models on a PC, why buy a cluster? Write applications quickly in Java, Scala, or any JVM... -
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Tribuo
Tribuo - A Java machine learning library
Tribuo* is a machine learning library written in Java. It provides tools for classification, regression, clustering, model development, and more. It provides a unified interface to many popular third-party ML libraries like xgboost and liblinear. With interfaces to native code, Tribuo also makes it possible to deploy models trained by Python libraries (e.g. scikit-learn, and pytorch) in a Java program. Tribuo is licensed under Apache 2.0. Remove the uncertainty around exactly which artifacts you're using in production. ... -
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Weka
Machine learning software to solve data mining problems
Weka is a collection of machine learning algorithms for solving real-world data mining problems. It is written in Java and runs on almost any platform. The algorithms can either be applied directly to a dataset or called from your own Java code. -
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AngClust
AngClust: Angle-based feature clustering for time series
.... * We defined three indicators to identify significant clusters: (i) the fluctuation degree of expression levels, (ii) homogeneity, and (iii) the degree of clustering while the clusters are functionally significant. * The clustering outcome of our algorithm (AngClust) is better than the currently most popular STEM algorithm. * AngClust can be used to analyze any short time series gene expression profiles. -
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MOA - Massive Online Analysis
Big Data Stream Analytics Framework.
A framework for learning from a continuous supply of examples, a data stream. Includes classification, regression, clustering, outlier detection and recommender systems. Related to the WEKA project, also written in Java, while scaling to adaptive large scale machine learning. -
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A SOA framework for web content classification, clustering and automated interlinking of terms between documents. Will provide an expandable set of services such as semantic search, ranking, retrieval and classification of large scale web resources.
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NGSEP
NGSEP (Next Generation Sequencing Experience Platform)
...The current version provides functionalities for both de-novo and reference guided analysis of sequencing data, including genome assembly, read mapping, variants detection and genotyping and de-novo analysis of data generated from reduced representation protocols. NGSEP also provides modules for analysis of genomic variation databases (VCF files), including functional annotation, filtering, format conversion, comparison, clustering, imputation, introgression analysis and different kinds of statistics. Since version 4, we provide functionalities for management of genomes and transcriptomes, including genome alignment and annotation of transposable elements. A complete list of functionalities is available in our wiki (https://sourceforge.net/p/ngsep/wiki/Home/). ... -
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openQRM - Cloud Computing Platform
Get latest Edition here: http://www.openqrm-enterprise.com.
openQRM is a web-based open source datacenter management and hybrid cloud computing platform that integrates flexibly with existing components in enterprise data centers. Releases available at https://github.com/openQRM/openqrm-community. Please visit http://www.openqrm-enterprise.com for latest 5.3 free Community Release. Includes important security updates, bugfixes and enhancements especially for KVM and Cloud plugin. openQRM abstracts Virtualization and supports the following... -
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DataSophon
The next generation of cloud-native big data management expert
Aiming at quickly deploying, managing, monitoring and automating the operation and maintenance of Big Data service components and nodes, helping you quickly build stable, efficient Big Data cluster services. The Three-Body Problem, a Hugo Award-winning work of the world's highest science fiction literature, is known for its stunning "hard science fiction" style, and its author Liu Cixin is credited with "single-handedly raising Chinese science fiction to a world-class level". As a very... -
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Alink
Alink is the Machine Learning algorithm platform based on Flink
Alink is Alibaba’s scalable machine learning algorithm platform built on Apache Flink, designed for batch and stream data processing. It provides a wide variety of ready-to-use ML algorithms for tasks like classification, regression, clustering, recommendation, and more. Written in Java and Scala, Alink is suitable for enterprise-grade big data applications where performance and scalability are crucial. It supports model training, evaluation, and deployment in real-time environments and integrates seamlessly into Alibaba’s cloud ecosystem. -
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Scipio ERP
An open source e-commerce solution
Scipio ERP is an open source e-commerce solution for complex business applications. The vast set of standard applications really lend themselves to further customization. With its built-in clustering and caching mechanisms, the software scales well with large-size operation, making it an ideal choice for mid- to large size companies, or as a hub for an integrated business architecture. -
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DynaQ
Innovative text document search. http://dynaq.opendfki.de for details.
The goal of DynaQ is to develop an inquiry system to explore the personal information space, supporting you with the searching paradigm 'orienteering'. DynaQ is a (desktop)search engine with enhanced functionality for file, email and blog search. Look at our GitLab homepage for sourcecode and documentation: http://dynaq.opendfki.de -
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Payara Server
Open Source Java Application Server Derived from GlassFish
Payara Server is a fully supported, developer friendly, open source Java application server originally derived from Glassfish as a drop in replacement. Payara Server’s architecture is innovative, cloud-native and optimized for production deployments. Officially compatible with Jakarta EE 8 and Eclipse MicroProfile, the application server is developed in collaboration with an industry-leading DevOps team and the global Payara community to ensure Payara Server is the best option for... -
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MyCAT
Active, high-performance open source database middleware
MyCAT is an Open-Source software, “a large database cluster” oriented to enterprises. MyCAT is an enforced database which is a replacement for MySQL and supports transaction and ACID. Regarded as MySQL cluster of enterprise database, MyCAT can take the place of expensive Oracle cluster. MyCAT is also a new type of database, which seems like a SQL Server integrated with the memory cache technology, NoSQL technology and HDFS big data. And as a new modern enterprise database product, MyCAT is... -
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NOVA
Analysis and visualization of complexome profiling data.
NOVA is a program designed to analysis complexome profiling data (Heide et al., 2012). A graphical user interface (GUI) provides various visualization tools, such as heat maps and 2D plots. Several hierarchical clustering algorithms (e.g., single linkage, average linkage, Wards linkage), different distance measures (e.g., Euclidean distance, Manhattan distance, Pearson distance), and various normalization techniques are implemented. Many additional functions like zooming, searching for proteins, image export, and automatic file format recognition support intuitive handling for biologists. ... -
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The Community Scheduler Framework (CSF) is a set of Grid Services, implemented using the Globus Toolkit, which provides an environment for the development of metaschedulers that can dispatch jobs to resource managers such as LSF, SGE, PBS and Condor.
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weka-MTreeClusterer
Flat clustering algorithm based on MTrees implemented for weka.
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EECluster
Tool for energy-efficient resource management in HPC clusters
EECluster is software tool for managing the energy-efficient allocation of the cluster resources. EECluster uses a Hybrid Genetic Fuzzy System as the decision-making mechanism that elicits part of its rule base dependent on the cluster workload scenario, delivering good compliance with the administrator preferences. In the latest version, we leverage a more sophisticated and exhaustive model that covers a wider range of environmental aspects and balances service quality and power... -
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Oryx
Lambda architecture on Apache Spark, Apache Kafka for real-time
Oryx 2 is a realization of the lambda architecture built on Apache Spark and Apache Kafka, but with specialization for real-time large-scale machine learning. It is a framework for building applications but also includes packaged, end-to-end applications for collaborative filtering, classification, regression and clustering. The application is written in Java, using Apache Spark, Hadoop, Tomcat, Kafka, Zookeeper and more. Configuration uses a single Typesafe Config config file, wherein applications configure an entire deployment of the system. This includes implementations of key interface classes which implement the batch, speed, and serving logic. ... -
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Quasar
Fibers, channels and actors for the JVM
Quasar is a library that provides high-performance lightweight threads, Go-like channels, Erlang-like actors, and other asynchronous programming tools for Java and Kotlin. Quasar is developed by Parallel Universe and released as free software, dual-licensed under the Eclipse Public License and the GNU Lesser General Public License. Quasar fibers rely on bytecode instrumentation. This can be done at classloading time via a Java Agent, or at compilation time with an Ant task. Quasar’s... -
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MarDRe
MapReduce-based tool to remove duplicate DNA reads
MarDRe is a de novo MapReduce-based parallel tool to remove duplicate and near-duplicate DNA reads through the clustering of single-end and paired-end sequences from FASTQ/FASTA datasets. This tool allows bioinformatics to avoid the analysis of not necessary reads, reducing the time of subsequent procedures with the dataset. MarDRe is the Big Data counterpart of ParDRe (link above), which employs HPC technologies (i.e., hybrid MPI/multithreading) to reduce runtime on multicore systems. ...
