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CEGA is a highly extendable layout plugin for Cytoscape based on an Evolutionary Algorithm. In contrast to other layout algorithms, CEGA lets users decide which features are important for the visualization of their graphs.
FO3D describes an XSL-FO standard compliant method for representing 3D content in the FO documents and provides an exemplary extension for the use with Apache FOP (Version 0.95) - available under the Apache License v2.0 - to create 3D PDF documents.
primeHandle is a set of data management tools in support of the PrIMe Initiative (http://primekinetics.org). primeHandle includes graphical user interfaces for searching through data collections, editing and submitting data to the PrIMe Data Depository.
Everything you need to build production-ready agents and models. Access 200+ Google and third-party AI models and tools.
Gemini Enterprise Agent Platform is Google Cloud's comprehensive platform for developers to build, scale, govern, and optimize agents and models. Choose from Google's most advanced models and third-party models like Anthropic's Claude Model Family.
Library for video broadcasting on the internet provided by a remotely operated robot.
This system uses video for the issuance of the JMF API and access to camcorders (1394), the library jvc1349.
ArrayPlex integrates various forms of microarray data from diverse annotation and primary data sources. It provides a programmatic framework (API set) for collaborative development and deploys as easy to maintain client-server architecture.
Swarm Chemistry simulates the dynamics of heterogeneous particle swarms and allows interactive design of particle recipes. Agents steer according to a set of simple kinetic rules based on its own kinetic parameters that may be different from others.
We are developing MIRACH, a Statistical Online Model Checker for Biological Pathway Models, based on the PLTLs formalism for expressing the rules/properties to be checked. MIRACH can currently check pathways models written either in CSML or SBML.
PORIS toolkit allows describing graph-based systems and their behavior in a snapshot. It provides a web
editor for a domain visual specific language (DSL) and transformation tools to generate software prototypes, system configurations, ...
Egothor is a high-performance, full-featured text search engine written entirely in Java. It is a technology suitable for nearly any application that requires full-text search.
h2:www is an easily extendable online interface for bioinformatical command-line tools, providing convenient project-oriented working facilities for multiple users.
JMacAdapter is a Mac OS X adapter for Java built as a reflective wrapper for com.apple.eawt.*, allowing programs to look and behave like native Mac OS X applications without having to depend on com.apple.eawt.* imports, which are often unavailable.
Java library to calculate heliocentric and geocentric planetary positions. Two types of calculations are supported: a 'fast' version which has an accuracy of about 1 arc second and a 'full' version that implements the full VSOP87 theory.
The Instrument Element is a Grid/Cloud component that provides the computational/data Grid with an abstraction of real instruments, and Users with a more interactive interface to control them. More information: http://instrumentelem.sourceforge.net/
Defuddle is a data translation engine that supports mapping arbitrary ASCII and binary file formats to a data model defined in XML Schema in a manner similar to, but not compliant with the Data Format Description Language (http://www.ogf.org/dfdl/).
Text annotation application (Tapp) is a stand alone software component that facilitates the quick annotation of text files for the purpose of creating labelled data for training, testing, and deploying machine learning models
LEMMing stands for Linux Enterprise Management and Monitoring. It's an environment that aims an easy way to take care of your HPC cluster. It is based WebServices. That lets you LEMMing multiple clusters throght the same interface.
SALaMy (Semantic Argument Labelling using Maximum Entropy) is a Semantic Role Labelling project using the Apache UIMA framework. Semantic arguments are labelled based on the Maximum Entropy paradigm.