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Express is an Agile project management tool. The web application is written using Flex while server-side component is a Spring based Java EE application.
cuftpd is an ftp-server written in java. It supports SSL/TLS, comes with local and remote userbase and statistics capabilities (via rmi over ssl),
an extensive permission system, event logging and supports "zipscripts" like pzs-ng.
Java Image Resizer and Uploader. This is an open source Java applet which allows web app developers to provide an easy way for their users to upload properly sized images to a web server using client-side resources for expensive resizing operations.
JXchange is an mail server multiplataform, written in Java language, like MS-Exchange. This project includes SMTP server, POP3 server, IMAP server, web management interface and webmail designed to run in almost all OS.
ABK SiteHoster is aLEHNS (a Lightweight Extensible HTTP Network Server). Developed in pure Java. Currently supports HTTP v1.1 Protocol's subset. Adding features to make fully compliant. Aiming to be a full-fledged WebSite Server with all Web Service
Web OS designed to integrate multiple web applications working under a common windows-like interface. Features: session management, skins, widgets, events, virtual desktops, Firefox and IE compatible. Tech.: J2EE, Javascript, HTML, CSS, XML, Java, ...
jGameAdmin is a Java based web application, targeting Linux and Windows systems. With jGameadmin, you can easily administrate your game servers, voice servers and customers over a single and intuitive web interface.
Accord Odette is a Java framework for developing your own Odette OFTP2 client/server, respecting your needs of integration and functionalities. It comes with base client and server classes for TCP/IP and to bridge connections through X.25 and ISDN.
ODSSA - is a system for storing, searching and viewing spatially and temporally indexed photos, videos, GIS tracks, ESRI shape, and other files. It consists of an import tool, open API Server, browser based Client for search and viewing files.
JAva DIstributed Framework provides a secure and flexible Framework for distributed grid and volunteer computing applications (separate client & server Framework). For more informations take a look at the project page http://jadif.sourceforge.net
DovetailDB is a schemaless, JSON-based database. It is similar in spirit to Amazon's SimpleDB, but allows for javascript to be executed on the server, and, within that context, provides full transaction support.
Server/client suite which provides per-user access control/firewall/QOS. Robust and high speed implementation is secure against MAC/IP spoofing, and can scale to large networks with many clients. Options for additional monitoring and captive portal.
A simple access control app that intends to replace declarative jaas security in web.xml for web applications deployed on Jboss app server and TOMCAT container. Also include an extension for PHP applications.
Cross-platform java remote desktop control and desktop sharing
jrDesktop is a cross-platform java remote desktop control and desktop sharing application that provides a remote display and control of a computer. It has many features. It works only on LAN, for the Internet-ready version visit www.firnass.com
Jitterbit is an open source integration tool that delivers a quick and simple way to design, configure, test, and deploy integration solutions. It supports many document types and protocols: XML, web services, database, LDAP, text, FTP, HTTP(S), file
Black scalpel is an advanced graphical (Swing gui) security and analysis tool written in Java, C and Assembler (platform independent). Current stage is early alpha, many features are still missing. Use SVN!
Carbon is a java based SERVER implementation which caters to different server falvors eg: raw data,HTTP, FTP and so on.
Spawning off from Carbon are different server implementations for HTTP/SOCKS proxy, FTP, HTTP, J2EE which are available in a jar.
(Yet another) Small Java Web-Server: A (Very) Small Java-Based Webserver. It allows you to publish ressources and Self-Generated Java-Pages in Object-Style (new Table("Title");).