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The Olduvai bioinformatics visualization system allows side by side comparison of:
TreeJuxtaposer: evolutionary trees
SequenceJuxtaposer: genomic sequences
The project consist in an open source implementation of the W3C Recommendation of the XML Key Management Specification 2.0 XKMS 2.0. It is compound of a XKMS Server and a Client API to access to the Server via Web Service.
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http://ewi.utwente.nl/~biorange/rshell - The RShell project is a plugin for the Taverna workflow system. It enables one to execute R scripts within the Taverna workflow system. The RShell processor is built on the RServe project. For more info:
Government (Generic) Services Infrastructure (GSi) is a unified technology platform which empowers business processes to be modeled, deployed, executed and managed in an intuitive and efficient manner.
I really hate that braindead sqlplus and really love psql. Unfortunately I have to work with Oracle, so I wrote psql for Oracle. It's written in Java, and uses GNU readline library.
A front end (middleware) system for interacting with the ADL-R (Advanced Distributed Learning - Repository) metadata repository. Web-based service keeps track of the state of your repository and allows you several ways to update the ADL-R via SOAP calls.
A collection of JSR-168 compatible portlets developed for Liferay which provide service integration and connectors to various software products used in academic environments.
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FreeLIMS is a Laboratory Information ManagementSystem ( LIMS ). Manage samples; create sample types from methods & parameters; easily generate reports & certificates; fine tune user rights. FreeLIMS is Open Source and Free.
Software tools for building interactive information visualization applications. Prefuse supports a rich set of features for data modeling, visualization, animation, and interaction for both Java (prefuse) and Flash (prefuse flare).
Modyna is an open source application to model dynamic systems and simulate their behaviour. Modyna lets you define a system visually. It automatically builds the equations to simulate the systems behaviour. Simulation results are shown as graphs.
The Flow Cytometry Laboratory Information ManagementSystem (FlowLIMS) is a web-based software system that gives users the ability to create and manage experiment protocols for the DiVa and FACScan flow cytometers
NPS is an enterprise CMS built in Java and oracle,with which you can easily manage and maintain multiple websites. With template tag technology based on ANTLR and ANT,data stored in oracle can be easily converted into HTML web pages,no programming needed
MelaJò Portal Framework is a framework to develop Java Enterprise/J2EE/MVC based applications rapidly and easily.
It's based on Finite State Machine concept. It's used for years
to create real business web applications with J2EE architecture.
A Java / Swing Port of the OpenIT Project -- "An Inventory, HelpDesk, Support, Issue Tracking, and Knowledge Base web application. Focuses on simplicity and ease of customization." -- See http://sourceforge.net/projects/openit for more details.
A webbased simple library system which can be used by library staff to manage the library and for members to book and borrow library material. This library system can be used not only for books but also for other electronic media materials like audio CDs
Developed in Java programming language, this software lets its users view and manipulate hierarchical data structures represented as a hyperbolic trees.
This is a tiny JMX agent for ZFS. It relies on the presence of the commands "zpool" and "zfs". It defines two MBean types, one for pools and another for datasets. This agent can provide ZFS-specific monitoring for management tools that support JM
Nessconnect is a GUI, CLI and API client for Nessus and Nessus compatible servers. With an improved user interface, it provides local session management, scan templates, report generation through XSLT, charts and graphs, and vulnerability trending.
epoline® PHOENIX (ePHOENIX) is a document and dossier managementsystem developed to support the process of handling Intellectual Property-related documents.
This is an implementation of the Drop Dead loot managementsystem used by the Elders kinship in the Lord of the Rings online. The algorithm is based on the Suicide Kings system.