Search Results for "bns-tools" - Page 29
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Showing 3190 open source projects for "bns-tools"
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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TUIT
Taxonomic Unit Identification Tool
For the installation instructions please see Wiki page: https://sourceforge.net/p/tuit/wiki/ IMPORTANT: since version 1.0.4.0 TUIT allows to select RDP-like formatted output to improve out of the box compatability with tools, that assume RDP-formatted input. A new field has been added to the properties.xml, please make sure to update it to contain <OutputFormat format="tuit"/> or <OutputFormat format="rdp"/> in the <BLASTNParameters> section. Read our paper in Biotechniques: http://www.ncbi.nlm.nih.gov/pubmed/24502797 Taxonomic Unit Identification Tool (TUIT) is a free open source platform-independent software, designed specifically to facilitate taxonomic annotation of nucleotide sequences via BLAST homology search against the NCBI databases. ... -
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Cyclone - Task Automation
Task Scheduler for Java, Groovy, Javascript, python & ruby
Cyclone is java-based rich GUI web tool for automating tasks with ease. Cyclone is a project that was borne out of necessity. Agreed, there are many native tools that allow task to be scheduled or automated on most operating systems, however, Cyclone is more than just an automation tool. In many programming languages, there are batch module/libraries available to schedule jobs, but need quite a bit of enhancements to provide similar feature set as Cyclone. Cyclone comes with a number of fascinating features Real-time progress and status montoring for jobs Pause, resume and stop an executing job Multi-user environment with in-built authentication and authorization modules Polygot - jobs can be implemented in java, groovy, ruby, javascript and python Easy administration and configuration - user management etc. ... -
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ANT4HG is an ANT task for HG, a distributed source control management system (http://www.selenic.com/mercurial).
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cnvOffSeq
detecting & genotyping intergenic CNVs using off-target exome data
cnvOffSeq is a set of Java-based command-line tools for detecting and genotyping intergenic copy number variation (CNV) using off-target data from whole-exome sequencing experiments. -
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WebCueroGalvez
Tienda virtual para la empresa "Diseños en cuero Gálvez"
El proyecto consiste de un sistema de gestión de ventas (web) de una empresa dedicada a la venta de artículos elaborados en cuero. El sistema permitirá realizar compras de artículos de manera no presencial. La empresa mejorará su gestión al contar con la información en tiempo real del área de ventas, lo cuál permitirá implantar un servicio de fidelidad al cliente. El proyecto se desarrollara usando tecnología Java (JEE). -
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Provides an ANTLR plugin (including grammar file editor with outline page and project nature with incremental builder) for the Eclipse platform
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Avalon Cheminformatics Toolkit
Avalon Toolkit for SMILES-based cheminformatics services
The Avalon Cheminformatics Toolkit contains tools to render and canonicalize SMILES and manipulate MOL file and related formats as well as structure fingerprinting. -
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grepp
An ultimate text-analysing tool
A command line tool for text file analyis, filtering, splitting and reporting. Runs under Java (1.5+), supports plugins written in Groovy. Has nix and win batch files in distributions. -
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TDD MAS Toolkit
A set of powerful tools to perform TDD on MAS based on JADE
The TDD MAS Toolkit provides a set of tools to perform Test Driven Development of MAS based on Jade. The toolkit allows developers to set up simulation based and test case scenario based testing, providing powerful insights of the MAS under construction and assuring that the interation protocols and agent interaction in general are been enacted as expected. -
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RDB2LOD
A software to publish Relational Databases in RDF format
This software facilitate and automate publishing, in the Semantic Web, linked open data obtained from relational database (RDB), through the integration between the D2RQ tools used in this process. It also offers a new tool that allows the semi-automatic customization of the generated mapping file in order to incorporate a domain ontology supplied by the user. -
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GW2 Tools
Some tools for GW2
Provide some tools for GuildWars2 -
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chbGUI
Free Linux backup tool *
License: FREEWARE (GNU General Public License). Automates backup creation using Unix tools. Configurable using a friendly user interface. Create different backups based on templates that can be tailored to distinct needs. (*) Tested on Linux and Mac OS X but may run properly without modifications on other Unix platforms that have the Bourne shell (/bin/sh) and a Java (1.6) or higher runtime environment. See documentation provided in the package for more details. -
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BlockSync
Single file syncing at a block level
BlockSync is a command line tool written in Java, designed to synchronize single large files (such as virtual disk images) across networks with limited bandwidth. It makes use of MD5 hashing to only transfer the data that needs to be transferred. Ideal for use in command line scripts. -
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CMIS Input plugin for Pentaho
Allows querying Content Management Systems that use the CMIS.
...Imagine using the information extracted for statistical purposes, for creating reports and, more generally, to analyse your document archives in a way unthinkable until now with the current tools available. All this is possible within the Pentaho Suite, the Open Source Business Intelligence platform, which is useful to the extraction and analysis of structured and semi-structured data. With this goal (the extraction and analysis of data) has been designed and developed the CMIS Input plugin for Pentaho Data Integration (Kettle) that allows querying Content Management Systems that use the CMIS interoperability standard. ... -
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CommandCentre
Command Centre
...The Command Centre is a Simulation Programming Framework for advanced Command and Control Simulators on Linux/Windows using C/C++ and Java. The Framework integrates with Leading Tools like Visual Paradigm (UML), Net Beans 7.0 (Java), and Code Warrior (C/C++). The codebase supports building Heterogenous Command and Control Consoles and Accelerated User Attached Audiovisuals. The Command Centre Real Time Simulation Framework (under RT Linux) allows designers to build Fast Prototyped Consoles for advanced Simulations running on Local Area Networks. -
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There are a large variety of tools for application of many techniques of software testing. Likewise, there are a variety of frameworks that facilitate developing search techniques (e.g. Metaheuristics ). However, there are few tools available to the integration of these tools, which would be suitable for the application of SBST (Search Based Software Testing). Furthermore, such tools require an advanced knowledge of software testing techniques and optimization techniques. ...
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This package contains different tools to add NLP capabilities for Lucene 4.x (it has been tested using Lucene version from 4.6.x to 4.8.1). Although it was originally developed for German, it is, mostly, language independent. It allows the user to lemmatize words to be indexed, to weight termy ba their parts of speech (e.g. weighting nouns mor hevaily than pronouns), and to add synonyms taken from GermaNet or a list you provide to the search index and thereby increase recall of lucene.
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CSV Tools
Tool for splitting and changing encoding or delimiters in CSV files.
Simple tool for converting CSV file. You can easily change file encoding, escaping or separator character. You can split the file into more smaller files as well. -
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Mechaglot, Calculate Semantic Similarity
Calculate semantic similarity for any human and human-like languages
...This project models my previous project: https://sourceforge.net/projects/semantics/ Difference is, this project does not use any database and computes any Strings as an input. JAVA was the language of choice, due to availability of modelling tools. This work is licensed under the Creative Commons Attribution-ShareAlike 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/4.0/. -Powered by WEKA, Classifier4J and SimMetrics. -
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Cascalog
Data processing on Hadoop without the hassle
Cascalog is a powerful Clojure (and Java) data processing and querying library built atop Hadoop (via Cascading), providing a high-level, Datalog-inspired abstraction for both big data processing and local computation. Cascalog is hosted at Clojars, and some of its dependencies are hosted at Conjars. Both Clo/Con-jars are maven repos that's easy to use with maven or leiningen. The Cascalog website contains more information and links to Various articles and tutorials. The best way to get... -
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adLIMS
adLIMS: a Laboratory Information Management System with ADempiere
...We process around 1500 samples/year resulting in hundreds of millions of sequencing reads, requiring automation and posing new challenges in data storage, monitoring of sample process and computational tools for analyses. Thus we need to standardize data management and tracking systems, built on a scalable, flexible structure with an easily accessible and web based interface, what is usually called Laboratory Information Management System (LIMS). -
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picard
A set of tools for working with high-throughput sequencing data
A set of tools (in Java) for working with next generation sequencing data in the SAM/BAM format. Note that development has moved to GitHub at https://github.com/broadinstitute/picard and support is available on the GATK forum at http://gatkforums.broadinstitute.org/categories/ask-the-team -
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Sanity4J simplifies running multiple code analysis tools on Java projects on an ad-hoc basis. It provides a single entry point to run the tools and produces a consolidated report, which presents all findings in an easily accessible format. Homepage: https://sanity4j.github.io/ Project page: https://github.com/Sanity4J/Sanity4J/
