Search Results for "research" - Page 27
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Showing 4992 open source projects for "research"
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A pure Java library for manipulating content MathML version 2, including read/write and statement execution.
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JASA allows researchers in agent-based computational economics to write high-performance trading simulations using a number of different auction protocols. The software also provides base classes for implementing simple adaptive trading agents.
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Dataset Metadata Collector
A Java web application which converts metadata to RIF-CS format.
The CSIRO Dataset Metadata Collector is a Java web application which reads metadata (in a variety of formats and from a variety of data sources) on datasets and produces corresponding RIF-CS metadata which are added (or updated) in a Repository. This project is supported by the Australian National Data Service (ANDS) through the National Collaborative Research Infrastructure Strategy Program and the Education Investment Fund (EIF) Super Science Initiative, as well as through the CSIRO. -
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The Jikes Research Virtual Machine (RVM) is designed to execute Java(TM) programs that are typically used in research on fundamental virtual machine design issues.
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AI Search Agent Framework
Java Framework for Artificial Intelligence Search Agents algorithms
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PromKappa 2.0 (DNA patterns in Java)
PromKappa 2.0 (Java source code and bin)
A Java adaptation of DNA patterns based on the article "Eukaryotic genomes may exhibit up to 10 generic classes of gene promoters". by Ilie Guta (Java source code for DNA patterns) -
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jAudio is a project implementing a number of common feature extraction algorithms for analyzing audio in java. Output is either in Weka's ARFF format or the ACE format. Can be used either as a GUI application, command-line application, or embedded. The primary repository is on github (dmcennis) which pushes to this projects github repository.
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JABM is a Java framework for building agent-based simulation models using a discrete-event simulation framework.
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Vianto
Video Annotation Tool
See https://sourceforge.net/p/vianto/wiki/ for version features and feature requests. Vianto is a Java-based video annotation / coding tool with graphical user interface that allows you to: - Record video (in OSX only) - Save and load markers to code the video with (timestamps automatically generated for events) - Double click on events and the video will jump to the right place in the video - Click a marker to select start time, click again to set end time of code or preset a... -
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Java Agents Multiple System
a Java API & Interpreter for AgentSpeak + Prolog
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NiCE
Modeling and Simulation made NiCE!
Notice! This project is now the Eclipse Integrated Computational Environment (ICE)! The new project page is www.eclipse.org/ice and the updated source code is at www.github.com/eclipse/ice . Contact: billingsjj <at> ornl . gov The NEAMS Integrated Computational Environment (NiCE) facilitates the flexible development, composition and use of a wide range of simulations, models and analysis tools for NEAMS integrated performance and safety codes. -
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JNode is a Java New Operating system Design Effort. JNode is a simple to use and install Java operating system for personal use on modern devices. Any java application runs on it, fast and safe. See our homepage for additional information.
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j2mod
Enhanced Modbus library implemented in the Java programming language
This is a fork of the jamod Modbus library, taken at version 1.2.1, released under the Apache 2 license, as contained in the SVN repository for that project. The goal of the j2mod project is to produce a more fully functioning Modbus(tm) communication library based on the Java programming language. It is the intention that this be an actively developed project, accepting submissions from professional software engineers with experience in Modbus Master and Slave development. -
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A Java interface and implementation for the W3C Web Ontology Language (OWL), used to represent Semantic Web ontologies. The API is focused towards OWL 2 and offers an interface to inference engines and validation functionality.
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Analyze My Genes
Compare gene analysis results from 23andme with the human genome
This program compares personal gene analysis results from 23andme with extracted databases from the human genome project. An typical example of an extracted database is a dataset which contains all alternative alleles which occur less than 1% of the time. -
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Integrated Development Environment Frameworks based on Internet and eXtensible technologies. The goal is to research in the development of interactive environments that facilitate distance programming and distance learning of programming languages.
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Java implementation of John Platt's Sequential Minimal optimization algorithm. This is an efficent Support Vector Machine solution.
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GSA-SNP is a gene set analysis software that can process SNP data as well as gene and haplotype data.
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ArtificialFastqGenerator
Ouputs artificial FASTQ files derived from a reference genome.
ArtificialFastqGenerator takes the reference genome (in FASTA format) as input and outputs artificial FASTQ files in the Sanger format. It can accept Phred base quality scores from existing FASTQ files, and use them to simulate sequencing errors. Since the artificial FASTQs are derived from the reference genome, the reference genome provides a gold-standard for calling variants (Single Nucleotide Polymorphisms (SNPs) and insertions and deletions (indels)). This enables evaluation of a Next... -
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Generic directory service (for the EPICS tool set). Directory entries are channels with properties and tags. Applications can query a web service to retrieve channels based on wildcard matching on properties and tags, and manipulate the directory data. Code has been moved to GitHub at https://github.com/ChannelFinder
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Notice: RMG-Java is no longer in active development. Please find the latest version written in Python at http://reactionmechanismgenerator.github.io To see the website o the old Java version of RMG, visit http://rmg.sourceforge.net RMG (Java version) is an automatic chemical reaction mechanism generator that constructs kinetic models composed of elementary chemical reaction steps using a general understanding of how molecules react (currently limited to C, H, O, and S atoms).
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The JTS Topology Suite is an API for modelling and manipulating 2-dimensional linear geometry. It provides numerous geometric predicates and functions. JTS conforms to the Simple Features Specification for SQL published by the Open GIS Consortium.
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BioSARN
BioSARN is an environmental niche model refinement tool
BioSARN (Biological Species Approximate Realized Niche) refines environmental niche model output using topographic, soil and land class filtering, enhanced temporal corridor definition, niche area quantification and output to a high spatial resolution land class model. This is a Java™ Desktop MicroSoft Windows Application with a simple GUI. Preferably BioSARN should be used with 64-bit Java and a substantial RAM as the application reads input files into memory to minimize compute times. -
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CRAFT HPC Floating-point Analysis
CRAFT: Configurable Runtime Analysis for Floating-point Tuning
CRAFT (Configurable Runtime Analysis for Floating-point Tuning) for HPC (High-Performance Computing) uses binary instrumentation to perform runtime analysis of floating-point code, detecting cancellations and making precision level recommendations. NOTE: THIS PROJECT HAS MOVED TO GITHUB!!!! https://github.com/crafthpc/craft -
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The FXL Project Eclipse Plugin leverages the integration of DSLs, (meta-) modeling approaches, code generation and the development of software configuration tools (sw-component-configuration).
