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CloudBurst is a parallel read-mapping algorithm optimized for mapping next-generation sequence data to the human genome and other reference genomes, for use in a variety of biological analyses including SNP discovery, genotyping, and personal genomics.
X-GAT (XML-based GeneticAlgorithm Toolkit) is a Java framework to optimize problems with Genetic Algorithms (GAs). Differently from other frameworks, X-GAT contains ready-to-use GAs implementations and new features can be easily added.
Open Song Composer is a free/open source music generator written in Java that learns through use of a geneticalgorithm. It can generate music in all major modes.
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Mainly include the codes of geneticalgorithm, interative geneticalgorithm, that are written in Java Applcations also included such as function optimization, simple fashion design optimization, face optimization and so on
Beagle is Java open source framework for running and managing nondeterministic algorithms such as genetic algorithms for solving complex problems. Beagle is fully modular and maintains whole history of algorithm progress for further analysis.
GAAF is a tool for analyzing Genetic Algorithms (GA for short). It allows to check the behavior of a particular GA resolving a particular problem so one can get empirical information to decide which GA best fits problem's conditions.
Shape is a molecular conformation prediction program. It uses a geneticalgorithm to efficiently search the conformational space of a biomolecule and then clusters the results. It is very simple to use.
Java API for implementing any kind of GeneticAlgorithm and Genetic Programming applications quickly and easily. Contains a wide range of ready-to-use GA and GP algorithms and operators to be plugged-in or extended. Includes Tutorials and Examples.
gaKnn(GeneticAlgorithm Optimized K Nearest Neighbor Classification framework) is a frameowork for KNN optimization with a geneticalgorithm. The genetic algothm used for this is JGAP (http://jgap.sourceforge.net/).
This is an academic project; the main objective is to generate an algorithm to parallelize a CNF formula and then feed the distributed parts to sequential SAT solvers, for this project we have choose to use Sat4J as the solver.
Primarily applied in experimental psychology, where it is used to create experiment schedules. It even can be applied to other planning-activities that have to met boundary constraints. Rando uses a genetic-algorithm to construct a fulfilled schedule.
A hierarchical representation language for music, which can be used as a human algorithmic composition tool or as a semi-automated composition tool using a geneticalgorithm with human listeners as the fitness function.
The Distributed Genetic Programming Framework is a scalable Java genetic programming environment. It comes with an optional specialization for evolving assembler-syntax algorithms. The evolution can be performed in parallel in any computer network.
Wodka is the implementation of a geneticalgorithm (GA) that can bread two dimensional structures that might be used as robots in sodarace competitions.
Popular Game 15 implemented in Java. The most intersting part of the project is the geneticalgorithm which solving the puzzle. Play the game here: http://www.geocities.com/todordimitrovbalabanov/the15/
Galapagos is a GeneticAlgorithm framework written in Java 5 with the intended audience of undergraduates in an Artificial Intelligence class. The goal of Galapagos is usability: a competent student should be able to learn this library in an afternoon.