Showing 142 open source projects for "cp/m"

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  • 1

    AntibiogramJ

    AntibiogramJ is a Java program for the reading of antibiogram-images

    AntibiogramJ is a Java program for the identification, measurement and categorisation of inhibition zones in antibiogram images captured with any device that incorporates a camera (including digital cameras and mobile phones). Citing AntibiogramJ: A. Alonso, C. Domínguez, J. Heras, E. Mata, V. Pascual, C. Torres, and M. Zarazaga. AntibiogramJ: a Tool for Analysing Images from Disk Diffusion Tests. Computer Methods and Programs in Biomedicine 143:159-169. 2017. DOI: http://dx.doi.org/10.1016/j.cmpb.2017.03.010 You can see more information about AntibiogramJ in https://sourceforge.net/p/antibiogramj/wiki/Home/ Several videos explaining the use of AntibiogramJ are available in https://sourceforge.net/p/antibiogramj/wiki/Videos/ AntibiogramJ includes now the EUCAST v.9.0. ...
    Downloads: 15 This Week
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  • 2
    RigolDso

    RigolDso

    Rigol (DS1052E) HMI

    ...I don't wish to control the DSO but read, manipulate and save data. It is a java application but at this moment it work on linux only, but I think it should be easy get it working for M$W. It works but it is a beta version, your linux user has to be able to read and write on "/dev/usbtmc0" (see readme.txt" file).
    Downloads: 0 This Week
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  • 3
    apache spark data pipeline osDQ

    apache spark data pipeline osDQ

    osDQ dedicated to create apache spark based data pipeline using JSON

    ...This uses java API of apache spark. It can run in local mode also. Get json example at https://github.com/arrahtech/osdq-spark How to run Unzip the zip file Windows : java -cp .\lib\*;osdq-spark-0.0.1.jar org.arrah.framework.spark.run.TransformRunner -c .\example\samplerun.json Mac UNIX java -cp ./lib/*:./osdq-spark-0.0.1.jar org.arrah.framework.spark.run.TransformRunner -c ./example/samplerun.json For those on windows, you need to have hadoop distribtion unzipped on local drive and HADOOP_HOME set. ...
    Downloads: 0 This Week
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  • 4
    Vrapper

    Vrapper

    Vim-like editing in Eclipse

    Vrapper is an eclipse plugin which acts as a wrapper for existing eclipse text editors to provide a Vim-like input scheme for moving around and editing text. Eclipse Update Site: http://vrapper.sourceforge.net/update-site/stable
    Downloads: 12 This Week
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  • 5
    Robocode championship manager

    Robocode championship manager

    A robocode championship manager made using JavaFx

    If you want to promote a robocode championship but do not have the right tools for this, that is the solution.
    Downloads: 1 This Week
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  • 6
    OpenChrom
    OpenChrom is a tool for gas chromatography and mass spectrometry. The focus is to handle data files from different GC/MS and GC/FID systems and vendors. Its functionality and algorithms can be extended using a flexible plugin approach, based on Eclipse RCP.
    Downloads: 8 This Week
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  • 7
    High-Throughput Tabular Data Processor
    ...HTDP can also import, process and convert Variant Call Format (VCF) files ver. 4.0, 4.1 and 4.2 (http://samtools.github.io/hts-specs/VCFv4.2.pdf). HTDP provides quick filtering functionality and can process data consisting of single or multiple input files. Citation: Madanecki P, Bałut M, Buckley PG, Ochocka JR, Bartoszewski R, Crossman DK, et al. (2018) High-Throughput Tabular Data Processor – Platform independent graphical tool for processing large data sets. PLoS ONE 13(2): e0192858. https://doi.org/10.1371/journal.pone.0192858
    Downloads: 0 This Week
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  • 8
    ApkFor 1.0

    ApkFor 1.0

    ApkFor helps to transfer forest growth and yield models using Android

    ...ApkFor was developed by Fernando PÉREZ-RODRÍGUEZ (fernando.perez@fora.es) and Maria MENÉNDEZ-MIGUÉLEZ. The project and Code are Beta and could be improved and re-used by anyone. In this case cite font as follows: "PÉREZ-RODRÍGUEZ F., MENÉNDEZ-MIGUÉLEZ M. 2017. ApkFor: Project and Code. https://sourceforge.net/projects/apkfor/" This project has received funding from the European Union’s Seventh Framework Programme for research, technological development and demonstration under grant agreement no 613762
    Downloads: 0 This Week
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  • 9
    EntOpt Layout

    EntOpt Layout

    Relative entropy optimization network layout plugin

    The goal of this project is to implement a graph layout / network visualization algorithm as a Java plugin for Cytoscape (http://cytoscape.org/), using a recently published relative entropy optimization based method, called Unified Data Representation (Kovács IA et al. Sci Rep. 2015). If you are using the plugin, please cite: Ágg B, Császár A, Szalay-Bekő M, Veres DV, Mizsei R, Ferdinandy P, Csermely P and Kovács IA (2019) The EntOptLayout Cytoscape plug-in for the efficient visualization of major protein complexes in protein-protein interaction and signalling networks, Bioinformatics 35(21):4490-4492 https://academic.oup.com/bioinformatics/article/35/21/4490/5475596 Our detailed Tutorial on the use of the plugin: https://suopte.com/entopt_2_1_tutorial_20200518.pdf A video about the version 2.1: http://suopte.com/entopt_2_1_tutorial_video.mp4 Don't hesitate to send any questions, comments or bug reports also to agg.bence {at} med.semmelweis-univ.hu.
    Downloads: 0 This Week
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  • 10

    spectralHMM

    A spectral method for inferring selection from time series data

    ***WARNING*** This software was migrated to: https://github.com/popgenmethods/spectralHMM Support and updates will only be available at this new address. This software implements the algorithms described in the following paper: Steinrücken, M., Bhaskar, A. and Song, Y.S. A novel spectral method for inferring general diploid selection from time series genetic data. Annals of Applied Statistics, Vol. 8, No. 4 (2014) 2203-2222
    Downloads: 0 This Week
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  • 11
    OPEN SEN PLATFORM

    OPEN SEN PLATFORM

    OPEN PLATFORM FOR SEN APPS (subproject of Computer as Therapy)

    Here we present results from "Computer@Therapy" project - OPEN SOURCE PLATFORM for SEN (special education needs), called iCT Framework tool and its apps. This tool works as central management app including users (class) manager, SEN apps manager (following the pre-defined communication protocol) and security (rights) manager. Thus each developer of new SEN app can just focus at the proper educational tasks in his app without the need of handling of app data management stuff around. Such...
    Downloads: 0 This Week
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  • 12
    metawatt

    metawatt

    Binner for assembled metagenomes

    ...The Metawatt is implemented in Java SWING and minimally depends on Diamond, HMMer3.1, BBMap, Prodigal and the Batik library for the export of SVG graphics. Citation: Strous M, Kraft B, Bisdorf R, TegetMeyer H (2012) The binning of metagenomic contigs for microbial physiology of mixed cultures. Frontiers in Microbial Physiology and Metabolism 3:410. doi: 10.3389/fmicb.2012.00410
    Downloads: 0 This Week
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  • 13

    scFvMiner

    Scripts for analysing NGS data

    These scripts written in java can be used for deep sequencing analysis of the scFv antibodies from a synthetic antibody library and yields complete sequence information on the randomized areas of antibodies enriched from the library by phage display. The methods are descriped in Lövgen, J., Pursiheimo, J.P., Pyykkö, M., Salmi, J. & Lamminmäki, U. (2016) Next generation sequencing of all variable loops of synthetic single framework scFv – application in anti-HDL antibody selections. New Biotechnology 33:790-796.
    Downloads: 0 This Week
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  • 14
    TCPMonPlus

    TCPMonPlus

    TCPMonPlus intercepts TCP packets and SOAP reqeusts

    ...User Name and Password may be supplied if the server requires HTTP authentication. NOTE: You can run the application in console mode using the following example command: java -cp . com.yasmoicoco.proxy.tcpmon.TCPMonitorPlus -console 9080 192.168.1.1 9080 true Using the scripts: Or You may execute one of the scripts as follows: Windows: TCPMonPlus.bat TCPMonPlusConsole.bat Non Windows: TCPMonPlus.sh TCPMonPlusConsole.sh Also known as TCPMon
    Downloads: 0 This Week
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  • 15
    JCLAL

    JCLAL

    A Java Class Library for Active Learning

    ...If you want to refer to JCLAL in a publication, please cite the following JMLR paper. The full citation is: Oscar Reyes, Eduardo Pérez, María del Carmen Rodríguez-Hernández, Habib M. Fardoun, Sebastián Ventura. JCLAL: A Java Framework for Active Learning. Journal of Machine Learning Research, 17(95):1-5, 2016.
    Downloads: 0 This Week
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  • 16

    jDALMAS

    A Java front-end to the dnrDALMAS Prolog Module.

    A Java front-end to the dnrDALMAS Prolog Module, as described in the following paper: Hjelmblom, M., & Odelstad, J. (2009). jDALMAS: A Java/Prolog Framework for Deontic Action-Logic Multi-Agent Systems. In A. Håkansson, N. Nguyen, R. Hartung, R. Howlett, & L. Jain (Eds.), Agent and Multi-Agent Systems: Technologies and Applications (Vol. 5559, pp. 110–119). Berlin / Heidelberg: Springer. http://urn.kb.se/resolve?urn=urn:nbn:se:hig:diva-3963
    Downloads: 0 This Week
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  • 17
    GDBServer Extender (gdbx)

    GDBServer Extender (gdbx)

    Extend GDB Server feature, OS Aware Debugging, Thread Stack Checking

    GDBServer Extender(gdbx)顾名思义就是为GDB调试扩展一些本来没有的功能。例如线程(任务)感知调试(OS Aware)、线程(任务)堆栈检查等。支持FreeRTOS、eCos。支持OpenOCD、J-Link、QEMU。支持Cortex-M、i386。 请移步https://code.csdn.net/zoomdy/gdbx获得更多内容。
    Downloads: 0 This Week
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  • 18
    This site contains four packages of Mass and mass-based density estimation. 1. The first package is about the basic mass estimation (including one-dimensional mass estimation and Half-Space Tree based multi-dimensional mass estimation). This packages contains the necessary codes to run on MATLAB. 2. The second package includes source and object files of DEMass-DBSCAN to be used with the WEKA system. 3. The third package DEMassBayes includes the source and object files of a Bayesian...
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  • 19

    EsiAisParser

    Robust Automatic Identification System Parser in Java

    ...AIS, the Automatic Identification System, is a system aiming at improving maritime safety by exchanging messages between ships, other vehicles in particular aircraft involved in search-and-rescue (SAR), and (fixed) base stations. To be precise, this package support the ITU-R M.1371-4 AIS standard. See our extensive javadoc and in particular the class AISParser for more information on how to use this package. See the ESI AIS Parser License for more information on the legal aspects. The parser was used in the Poseidon project, and is improved in the Metis project to better handle uncertain information. ...
    Downloads: 0 This Week
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  • 20

    rpgboss

    Built to be ease of use, with no programming knowledge, Multi-platform

    A 2d rpg game engine created to be ease of use. Built in Scala and libgdx. Also our community forums http://rpgboss.forumatic.com
    Downloads: 0 This Week
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  • 21
    Ceres CP, to use with eAthena and other Athena SQL based servers
    Downloads: 7 This Week
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  • 22

    JSim

    Java-based discrete event simulator of an M/M/s queue system

    JSim is a Java-based discrete event simulator of an M/M/s queue system. The target audience are students and educators who may use it to explain and understand the basic principles of the system. JSim includes a library of classes that can be used to modify the application to simulate other types of queuing systems as well. Therefore, it may be used as starting point to build larger, application specific simulator.
    Downloads: 0 This Week
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  • 23
    SignalDiagrams

    SignalDiagrams

    Digital/Analog signals visualization tool

    A JavaFx 8 educational application that will let you visualize digital and analog signals from a binary input and let you export the chart in SVG (Everything is in progress). Digital: Bipolar, CMI, NRZ-L, NRZ-M, NRZ-S, Manchester, Manchester differential, Miller, MLT-3, pseudoternary, RZ, Unipolar. Analog: Phase, Frequency, Amplitude.
    Downloads: 0 This Week
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  • 24
    clok

    clok

    Fancy clock for Android home screen

    0.10.2 Fixed: bug #1 — clok not starting after deleting and re-placing on screen. --- Android home screen widget that shows current time (H,M,S) in a fancy way – with no minutes hand, but a circle sector staring (before half an hour), or ending (after half an hour) at the hour hand. How to read the time? - easy — seconds: violet arc starting at standard 12 o'clock; - medium — hour: if minutes are less or equal 30 then yellow hand shows current hour, if minutes are more than 30 then yellow hand shows the hour to come...
    Downloads: 0 This Week
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  • 25

    PerformNet

    Queue network modelization tool

    ...L’équipe était composée de : Philippe Olivier, François Lemonnier-Lalonde, Dominique Tremblay et François Moreau. Le projet a été réalisé pour le cours de Génie logiciel orienté objet, donné par M. Jonathan Gaudreault à l'Université Laval. Le projet consistait à développer un logiciel de modélisation de réseau de files d’attente, aussi appelé un réseau de Jackson. Chaque nœud du réspeau représente une station de traitement et chaque arc orienté représente un chemin possible d’une station à une autre. Le réseau possède toujours un point d’arrivée et de sortie. ...
    Downloads: 2 This Week
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