Search Results for "the command line" - Page 17
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Showing 2911 open source projects for "the command line"
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...The latest MTurk SDKs, with support for most common programming languages, are now a part of the Amazon Web Service (AWS) SDKs at https://aws.amazon.com/tools/. With the AWS SDKs, you can also connect to MTurk using the AWS Command Line Interface (https://aws.amazon.com/cli/), allowing you to perform operations from your Windows, Mac, or Linux command line without having to write code.
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RED
RED-RNA Editing sites Detector.
RED(RNA Editing Detector) is a program to detect and visualise RNA editing events at genomic scale using next-generation sequencing data. RED can also be used in command line. RNA editing is one of the post- or co-transcriptional processes with modification of RNA nucleotides from their genome-encoded sequence. In human, RNA editing event occurs mostly by deamination of adenosine to inosine (A-to-I) conversion through ADAR enzymes. -
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The VCS to ICS Calendar Converter allows you to convert VCALENDAR files (for example generated by Nokia nbuexplorer or Microsoft Works) to the newer iCalendar format, used by Android and iOS for example. It allows the parsing of events and todo's.
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AutoReplacerPlus
Automatic correction of software bugs and grammar mistakes
Automatic correction of software bugs announced in compilers (clang, gcc) / Static Code Analysis tools (cppcheck, FindBugs) and grammar/style errors like in LanguageTool. Usage: use tool (e.g. cppcheck) and store results in a text file. Afterwards call: autoreplacerplus mytextfile -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Seedlet
Seedlet is a source-code-embedded snap-on GUI for java applications.
Seedlet is an open-source source-code embedded snap-on GUI for standalone Java applications. It can be used for development and testing of independent classes, GUIs for command-line APIs or as independent applications. In addition to a simple GUI, Seedlet provides lots of extras useful both for testing and for applications. It comes with a simple JSR-223 scripting framework, easy JDBC access, many GUI convenience method and other 'under-the-hood' functionality besides. -
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VCF Split
Vcard File Splitter
...It ist a executable jar file, so starting it with java -jar vcfsplitter.jar or double clicking it in a gui should work fine. You can also specify evertyhing by command line as follows: java -jar vcfsplitter.jar <infile> <outdir> For the source click on the website link.. -
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Tanit is a set of Oracle to Kopi (a Java based framework) migration tools providing automatic translation of your Oracle PL/SQL, Forms and Reports applications with more portability and ease of use
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Card Raytracer Benchmark
Short C++/Java/C#/Python benchmark
This is a short C++/Java/C#/Python benchmark. Based on Paul Heckbert's sources. Thank you Paul! -
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Grotag views Amigaguide documents or converts them to HTML and DocBook XML. Additionally it can validate and pretty print such documents.
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The Maltcms - Modular Application Toolkit for Chromatography Mass-Spectrometry is a JAVA API for preprocessing, alignment, analysis and visualization of data stored in open file formats used in Proteomics and Metabolomics research.
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JBrute
Open Source Security tool to audit hashed passwords.
JBrute is an open source tool written in Java to audit security and stronghold of stored password for several open source and commercial apps. It is focused to provide multi-platform support and flexible parameters to cover most of the possible password-auditing scenarios. Java Runtime version 1.7 or higher is required for running JBrute. Supported... -
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Kokpit-db is an integrated monitoring, comparison and performance analysis software for Oracle databases. It can compare and monitor versions 8i, 9i, 10g and 11g. Supports standby databases and ASM instances. GUI and command line interfaces available
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metawatt
Binner for assembled metagenomes
The Metawatt binner is a graphical binning tool that makes use of multivariate statistics of tetranucleotide frequencies and differential coverage based binning. It also performs taxonomic assessment of binning quality (via diamond BLASTx). Created bins can be edited and exported as fasta. The Metawatt is implemented in Java SWING and minimally depends on Diamond, HMMer3.1, BBMap, Prodigal and the Batik library for the export of SVG graphics. Citation: Strous M, Kraft B, Bisdorf R,... -
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yEdGen
yEdGen can open a flow chart and generate ANSI C code from it.
yEdGen can generate ANSI C code from a graphml file. You can use yEd Graph Editor, save your flow chart (following some yEdGen rules) in graphml and open it with yEdGen to generate ANSI C code. You can extend yEdGen to generate code for other language. This tool is student oriented. -
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autoCode4
Synthesizing embedded control software from formal specifications
autoCode4 is an engine that synthesizes controllers from formal specifications described under a subset of linear temporal logic (LTL). Importantly, it synthesizes synchronous dataflow controllers (in Lustre or in Ptolemy II form) and maintains requirement-to-code traceability. Such feature is mandated in developing safety-critical systems and are considered essential for specification validation or integrating manual implementation such as legacy code. The LTL specification captures... -
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DRX
Documentum administration tool
DRX is a powerful exploration, auditing, and documentation tool that allows Documentum administrators and developers to quickly document vital information about their repositories and environments. DRX provides a simple UI to facilitate logging into the Documentum repository, configuring and running specific reporting modules, and viewing the resulting reports. DRX reports are generated in HTML for easy viewing and XML for more complex processing. DRX is distributed as an EXE file that... -
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GFinisher
genome assembler finisher, gap, gap close, sort contig
GFinisher is an application tools for refinement and finalization of prokaryotic genomes assemblies using the bias of GC Skew to identify assembly errors and organizes the contigs/scaffolds with genomes references. contact dievalg at gmail.com -
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RSS Atom Feed Analytics With MapReduce
This is a data analytics project for RSS feeds using hadoop MapReduce
This project accepts the output of jatomrss project as the input. It applies the MR logic on the same to perform the analytics -
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TER implements the CCSDS Recommendation for Image Data Compression (CCSDS 122.0-B-1). TER also adds new features to the Recommendation. TER is designed and programmed with the aim to provide a good basis to test and develop the CCSDS Recommendation.
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This is a RSS and Atom feed parser written with Java 1.5
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PriorityPruner is a software program which can prune a list of SNPs that are in high linkage disequilibrium (LD) with other SNPs in the list, while preferentially keeping SNPs of higher priority (e.g., the most significant SNPs in a genome-wide association study).
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XML2CSV-Generic-Converter
Flatten XML into CSV to suit your mood
...I made it in order to extract data from big XML files and gather them in files more easily opened with a spreadsheet because I didn't find anything adapted to my needs over the Internet when I needed to (Java + truly generic + self-contained algorithm + Unix like command line options + efficiency). It is packaged as an auto executable Jar for convenient command line execution but might as well be interfaced directly by a Java class as part of a broader [yet non commercial] software. It handles attributes, repeated elements, and so on, and produces results which level up with what spreadsheets generate when they import native XML (at least in its most extensive execution mode). ... -
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SmartSlog (Smart Space Ontology) is a software/application development kit (SDK or ADK) for programming Smart-M3 agents (Knowledge Processors, KPs) that consume/produce smart space content according with its high-level ontological representation. SmartSlog applies the code generation approach: given an OWL ontology description, the ontology programming library is produced. The latter provides API to access the smart space via a Smart-M3 Semantic Information Broker (SIB) and data structures...
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Hyperic is application monitoring and performance management for virtual, physical, and cloud infrastructures. Auto-discover resources of 75+ technologies, including vSphere, and collect availability, performance, utilization, and throughput metrics.
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BagaturChess
Java Chess Engine
This is UCI Chess Engine writen in Java. Since version 1.4 (inclusive) the project was moved to https://github.com/bagaturchess/Bagatur