Showing 1374 open source projects for "data science"

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  • 1

    DimerRemover

    Remove adapter dimers from NGS data

    This program can be used to count or remove adapter dimers in fastq files. Using a provided adapter sequence, it generates variations of this sequence and stores them in a hash table. The reads can then be directly matched against the hash. It is far more time efficient than doing alignment.
    Downloads: 0 This Week
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  • 2
    MEISE

    MEISE

    Native note editor for the MEI encoding format

    The MEI Score Editor (MEISE) is an eclipse-based music notation editor for the musicological XML-based encoding format of the Music Encoding Initiative – MEI (http://music-encoding.org). It is developed at the Musicology Seminar Detmold/Paderborn, University of Paderborn (http://muwi-detmold-paderborn.de) as part of the german part of the research project "Digital Research Infrastructure for the Arts and Humanities" – DARIAH-DE (http://de.dariah.eu). For detailed information about the...
    Downloads: 1 This Week
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  • 3

    Cost-sensitive Classifiers

    Adaboost extensions for cost-sentive classification

    Adaboost extensions for cost-sentive classification CSExtension 1 CSExtension 2 CSExtension 3 CSExtension 4 CSExtension 5 AdaCost Boost CostBoost Uboost CostUBoost AdaBoostM1 Implementation of all the listed algorithms of the cluster "cost-sensitive classification". They are the meta algorithms which requires base algorithms e.g. Decision Tree Moreover, Voting criteria is also required e.g. Minimum expected cost criteria Input also requires to load an arff file and a...
    Downloads: 0 This Week
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  • 4
    Statcato
    Statcato is a Java software application for elementary statistics. Its features include data and graph generation, probability distributions, descriptive statistics, confidence intervals, hypothesis tests, correlation, regression, and analysis of var
    Downloads: 2 This Week
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  • 5
    wingS
    wingS (wingS is net generation Swing) is a Java library for developing web based AJAX applications in a way like developing Swing based applications.
    Downloads: 0 This Week
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  • 6
    LPCforSOS is a machine learning framework with a special focus on structured output spaces and pairwise learning. It supports currently multiclass, ordinal, hierarchical, multi-label and label ranking classification settings.
    Downloads: 0 This Week
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  • 7
    NanocalcFX

    NanocalcFX

    Open Source Data Evaluation Software

    NanocalcFX is a free and open source evaluation software for a simple yet comfortable solution to deal with thousands of transport kinetics measured with a fluorescence microscope or similar kinetics. Data can be imported from CSV or Excel files or using the dedicated image stack analyser (NISA). You can get sample data at the nanocalcFX homepage. Note that nanocalcFX is currently in a beta state.
    Downloads: 1 This Week
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  • 8

    A Data Generator

    A tool to generate synthetic test data useful to Record matchers

    With growing amount of information from multiple sources it has become very hard to relate information to the correct real life entities. Record matching software try to solve this by machine learning techniques. To do this effectively, its necessary to train the record matcher with proper test data which is identical to real life data. Hence, there is a need for a data generator to create the synthetic data to be used for evaluating the quality and capability of record matching software....
    Downloads: 0 This Week
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  • 9
    Cuttlefish aims to be a highly extensible visualization and analysis platform for all kinds of network data. IMPORTANT: The Cuttlefish project has been migrated to github: https://github.com/dev-cuttlefish/cuttlefish
    Downloads: 0 This Week
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  • 10

    SnowGuestimator

    Simulation to estimate snow heights

    SnowGuestimator is a simulation software to estimate snow heights. According to weather data It calculates how much snow may potentially fall naturally, how much could propably be produced artificially and how many days of skiing would be possible.
    Downloads: 0 This Week
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  • 11
    Framework for text mining, data integration and data analysis. Keywords: ontology and graph alignment, relation mining, warehouse, semantic database integration, bioinformatics, systems biology, microarray, Java.
    Downloads: 0 This Week
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  • 12
    HW SOM

    HW SOM

    SOM - Self-Organizing Maps of Teuvo Kohonen

    It's a "Hello World" implementation of SOM (Self-Organizing Map) of Teuvo Kohonen, otherwise called as the Kohonen map or Kohonen artificial neural networks.
    Downloads: 0 This Week
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  • 13
    TOPS_CeMM

    TOPS_CeMM

    User Friendly Data Analysis Tool for Interaction Data

    TOPS provides the benchtop scientist with a free toolset to analyze, filter and visualize data from functional genomic gene-gene and gene-drug interaction screens with a flexible interface to accommodate various different technologies and analysis algorithms in addition to those already provided here.
    Downloads: 0 This Week
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  • 14
    Hilbert II - QEDEQ

    Hilbert II - QEDEQ

    proof verifier for mathematical proofs and documentation generator

    In the tradition of Hilbert's program we create a formal correct (checkable by a proof verifier) but readable (like an ordinary LaTeX textbook) mathematical knowledge base which is freely accessible within the internet. Logic and set theory started.
    Downloads: 1 This Week
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  • 15
    NISA

    NISA

    Image Stack Analyzer

    OpenCV powered image stack analyser for data extraction and preparation. Can be used in conjunction with nanocalcFX. You can get sample data at the NISA homepage. Currently in pre-alpha state.
    Downloads: 0 This Week
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  • 16
    Authors: Jesús Río Álvarez, Ana García Serrano (ETSI Informática, UNED) LinkedDataGenerator is an application able to enrich video transcriptions with information gathered from the Linked Open Data(LOD) cloud. The system performs NER detection from the transcriptions, then URIs are assigned to the detected entities using DBPedia Lookup Service, Wikipedia API and Sindice. Finally, the entities are enriched with information gathered from LOD datasets. The enrichment process is guided...
    Downloads: 0 This Week
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  • 17
    eClims (Extended Clinical Information Management System) is an Open Source software to help Proteomics researchers to manage clinical data. This project is strongly related to the ePims™ project.
    Downloads: 0 This Week
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  • 18
    xBook

    xBook

    xBook is a framework for archaeological databases

    xBook is a common framework for several archaeo-related database applications developed and published by Ludwig Maximilian University of Munich. All database applications that are based on the framework (called Books) provide the same basic technical features, but each application can be extended individually. Especially the Synchronisation and the User Rights Management are strong features that allow creating backups and sharing your data to collaborate with other users. The...
    Downloads: 0 This Week
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  • 19
    Graphiti is a generic graph editor plug-in for Eclipse created at the IETR/INSA of Rennes that can load/edit/save potentially any type of graph in text or XML. Please consult the project homepage at http://graphiti-editor.sf.net for more information.
    Downloads: 0 This Week
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  • 20

    Cylindrical BLAST Viewer

    Alignments in Rotating Cylinder / 3D

    3D viewer which arranges BLAST hits and other bioinformatics-related alignments in a rotating, cylindrical display. Feedback appreciated. NOTE: requires Java3d installation. Superceded by Cylindrical Alignment App
    Downloads: 0 This Week
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  • 21
    jk3d is a java code for 3d interpolation of scattered data. jk3d uses a quality weighted ordinary Kriging method and optional an inverse distances weighting method. It has no graphical user interface and uses ASCII files to define the input.
    Downloads: 0 This Week
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  • 22

    Jlint

    Static analyzer for Java bytecode

    Jlint will check your Java code and find bugs, inconsistencies and synchronization problems by doing data flow analysis on the code and building the lock graph. Jlint is fast, easy to learn, and requires no changes in the class files to be checked.
    Downloads: 4 This Week
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  • 23
    ENRICH Garage Engine (EGE) is a java based tool which, by means of plug-ins, provides services for data conversion, transformation and validation. The software was initially created by PSNC and OUCS as a part of the ENRICH project funded by the EC.
    Downloads: 0 This Week
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  • 24
    Framework (scripts, configuration, code) to build free and public services around travel and leisure data. That project makes an extensive use of already existing data sources such as Geonames and dbPedia, and adds some glue around those (eg, links).
    Downloads: 0 This Week
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  • 25

    bioluminescence

    A java library for polymorphic genome assembly.

    Bioluminescence is a java library for facilitating de novo genome assembly in the context of reads sampled from a single highly-polymorphic diploid individual. Bioluminescence implements a novel algorithm which uses an artificial neural network to classify contigs in a genome assembly as haplotype-specific or not-haplotype-specific. It then uses this information to partition the original input read set into two subsets, each of which has been enriched for one of the haplotypes. Initial...
    Downloads: 0 This Week
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