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Infomap is a Java component for displaying and manipulating nodal data. It gives the user the ability to visualize large graph or tree structures by means of expanding and collapsing portions of the structure and by easily zooming in and out.
GraphScript project is a network theory simulator based purely on Java and Java scripting engines.
It is intended to allow fast development, testing and visualization of network theory (graph) algorithms.
JGraphica is a graphical platform for developing oriented and not-oriented graph algorithms. The platform allows the creation and management of graphs, eliminating the burden of creating some custom solutions for graph editing.
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The Graph Theory Tool is a simple GUI tool to demonstrate the basics of graph theory in discrete mathematics. It allows you to draw your own graph, connect the points and play with several algorithms, including Dijkstra, Prim, Fleury
fedg extracts knowledge and relevant events in chinese texts to generate Feature Event Dependency Graph.FEDG is a knowledge representation model,meaningful for latent knowledge discovery and efficient reasoning.
Java implementation of operations on undirected or directed graphs, in the aim of providing some simple tools for spectral graph theory and network understanding (-> Telecoms).
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prOOst is a provenance storing system, which allows users to store their provenance information in OPM notation. It is based on a graph database and can be accessed for querying and adding of information through a REST interface.
Ged(Pluginable Graph Editor) is modern visual Graph Editor, written on java, with pluginable interface for different algorithms on graph's and different graph's formats.
gSemSearch is a tool searching for relation among entities in graph or network structure. It exploits spread of activation algorithm and user interaction with graph data. Posible applications are: Email Search (see http://ikt.ui.sav.sk/esns/) or BI
Create a graph of your computer, with files, folders, emails, contacts ... as nodes and logical relations, associations as edges. Use this graph to control your computer and locate the data you need. See things in context!
Why is a diagnostic visualisation tool driven from stack back-traces. Given a stack backtrace is displays an execution graph containing the source highlighting the execution path and inferring application state from that path.
This project is an exercise and proof of concept. It aims to minimize the tree width of the tree decompositioned graph G with the methods of genetic algorithms.
The Copybook Adapter Generator will generate a Java object graph based on a copy book, or set of merged copybooks (i.e. header, body, footer). Handles length validation, proper field padding, redefines, etc.
A realtime collaborative mind-mapping project. AmoebaChat allows the user to send and receive chat-style messages in an interconnected graph. This allows for a new way of communicating between parties that hasn't been explored yet.
Plugin to integrate databases into semantic middleware
The goal of this project is to provide a reusable library to transform data objects from any database to content objects by a generic, configurable ContentProvider for the iQser GIN Server. These content objects are indexed and analyzed by the semantic middleware for a linked content and concept graph.
http://www.iqser.com
DagMap Vis is a java application aims to visualize DAGs (Directed Acyclic Graph) with a combine node link diagram and an adapted treemap layout. Based on prefuse, the application gives some useful interactions to navigate in hierarchical data structures.
Danaides stores meta-data from biological banks in a graph databases as well as OBO formatted ontologies.
It also provides a web query interface to parse ontologies or extract nodes based on ontology requirements.
Example: Get all known elements that are in family of Fish (species ontology) AND a RNA (sequence ontology).