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DotPlot is an Eclipse plug-in to graphically compare word sequences of any type of text. Matches will be plotted as dots on a graph. Similarities in thousands of lines of text or code will result in typical textures and diagonals in the plot.
This is a implementation of the 'enhanced Topic-based Vector Space Model' (eTVSM) using the python language. A Java-Version and maybe other java-code contributions are planned.
Framework for storing and editing Forestry-related XML data, with a specialised graphical interface for each object type. Plug-in API for adding functionality. Coded in Java, uses WebStart for distribution, swing GUI, ~100k lines of code.
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CloneAnalyzer is a tool for software quality analysis. It allows you to find, display and inspect clones, which are fragments of duplicated source code resulting from lack of proper reuse. It can be used as a plugin for Eclipse and on the command line.
Sight provides a friendly interface to create and connect agents for bioinformatics. The workflow supports multiple responses to a single request, structure transforms, filters and request history access.Can talk with ordinary http servers (get and post)
Sequence studio main package provides classes and interfaces for various kinds of sequence alignment. Differently from regular expressions it computes similarity with two initially unknown strings. Project page provides code generating applet.
** IMPORTANT NOTICE ** 10 Feb 2006 Code is being moved to the SMI subversion repository (http://smi-protege.stanford.edu/svn/owl/trunk/) Project will continue to be open source. ProtegeOWL info at: http://protege.stanford.edu/overview/protege-owl.html
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