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math lib for .NET. n-dim arrays, complex numbers, linear algebra, FFT, sorting, cells- and logical arrays as well as 3D plotting classes help developing algorithms on every platform supporting .NET. Sources from SVN, binaries: http://ilnumerics.net
Annotation and enrichment of Next-Gen sequencing data
Note: This version requires additional SQLite database files. Contact the developers to obtain them.
Use http://www.integrativegenomics.org/ for the latest data and analyses.
GenomeRunner is a tool for automating genome exploration. It performs annotation and enrichment analyses of user-provided genomic regions (SNPs, ChIP-seq binding sites etc.) against >6,000 (human genome) epigenomic features available from the UCSC genome browser.
Input - any genome-wide data data in .bed...
GUI based VB.net line count program for multiple extensions. The count is executed by folder, not by individual files. Includes the option to create and save the count to an excel workbook. Counts are accurate for .cpp and .h file types.
Refal.NET - Versatile, Compact yet Powfull Text Transformer and Compiler-Writing System. Based on Refal.NET Virtual Machine (+Refal.NET Compiler), this RAD-tool might be used for rapid prototyping, decreasing up to 10 times development efforts.