Search Results for "inference"

NEWS: 11-07-2013 A new version Virmid 1.1.0 has been uploaded. 08-29-2013 Virmid paper is now published in Genome Biology. Kim S et al, "Virmid: accurate detection of somatic mutations with sample impurity inference", Genome Biology 2013, 14:R90 http://genomebiology.com/2013/14/8/R90/abstract Virmid (Virtual Microdissection for SNP calling) is a Java based variant caller designed for disease-control matched samples. Virmid is also specialized for identifying potential within individual contamination where the disease sample cannot be purified enough. ...

QUASI is a toolkit to rapidly assess the quality of shRNA-Seq based data and call differential abundance using common statistical inference methods (DESeq, edgeR, baySeq).

Alchemy is a software package providing a series of algorithms for statistical relational learning and probabilistic logic inference, based on the Markov logic representation.

Implematation of robust depth-based inference tools for microarray data (a scale curve, to measure the dispersion of a set of curves, a rank test to decide if two groups of curves come from the same population, and classification techniques).

A Java Implementation of Latent Dirichlet Allocation (LDA) using Gibbs Sampling for Parameter Estimation and Inference

Java Expert Rule Based Inference Language. Jerbil is an open source rule processing engine written in Java. Currently Jerbil supports a full set of processing functions with text-based and XML interfaces; a Java interface is planned.

Genetic programming environment to inference context free grammars base on positive and negative examples of language.

This is a Python package for general Bayesian inference.

pystats is a comprehensive Python module implementing algorithms for statistics and information theory, including probability distributions, descriptive statistics, analysis of variance, regression, and inference.

RuleWorks is a rules-based application development tool providing the convenience of cross-platform development combined with one of the most powerful high level rules-based languages and fastest inference engine.

RISO: distributed, heterogeneous Bayesian belief networks. Belief network: a probability model defined on an acyclic directed graph; distributed: nodes can be on different hosts; and heterogeneous: allowing different types of conditional distributions.

HORUS is a system for knowledge acquisition, hypothesis generation, inference and learning. It is an interactive, internet environment accessible to a diverse community of users (public-access or membership basis) - see also UMKAILASH project for more.

In Green Cloud here is a central global server which does the work of global database management along with providing complex analysis services for the users (farmers, scientists) through the client machines and the public access web portal. The existing agricultural databases throughout the world can also be used for inference purposes and their data may also be updated by our server. The meteorological servers can be accessed for climate data.This server-client architecture mandatory in present and even near-future circumstances as the client machine has to be low-power and low-cost for the feasibility of the system in Indian context. Therefore, the complex analysis (Expert system analysis in accordance with world-wide data) has to be done on server. ...