Showing 1381 open source projects for "engineering"

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  • 1

    owl reasoning over big biomedical data

    A OWL reasoning framework for the analysis of big biomedical data

    A general OWL reasoning framework for the analysis of big biomedical data and implement a MapReduce-based property chain reasoning prototype system. OWL reasoning method is ideally suitable for problems involved complex semantic associations because it is able to infer logical consequences based on a set of asserted rules or axioms. MapReduce framework isused to solve the problem of scalability. In our experiment, we focus on the discovery of associations between Traditional Chinese Medicine...
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  • 2
    gtkhst is a collection of GLib2 objects to compute statistics (mean, variance, correlations) in 1 and 2 dimensions and a set of Gtk2 widgets to display 1D and 2D histograms as well as trace plots showing the evolution with time of the monitored quantity
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  • 3
    FREJ
    FREJ stands for "Fuzzy Regular Expressions for Java" - it is a command-line tool and library which allow you easily compare strings with patterns disregarding nasty typos and considering several variants (like "Barack Obama", "B.H.Obama" etc.) Project sources are moved to github: https://github.com/RodionGork/FREJ
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  • 4
    Argunet

    Argunet

    argument map editor for analyzing and visualizing complex debates

    Argunet is a client-server software for computer-supported argument visualization (CSAV). Reconstructed debates are visualized as argument maps and can be shared through the Argunet Server.
    Downloads: 2 This Week
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  • 5
    jBPM

    jBPM

    open-source, flexible Business Process Management (BPM) in Java

    jBPM is a business process management system. The light-weight, embeddable engine can execute native BPMN2. jBPM offers eclipse-based and web-based tooling for developers and business users to create, monitor and manage your processes.
    Downloads: 64 This Week
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  • 6

    Trowel - Sequencing Error Corrector

    Error Correction Module for Illumina Sequencing Reads

    Trowel is an error correction module for Illumina sequencing reads, which is based on the k-mer spectrum approach. This tool is the first tool that uses a quality threshold instead of a coverage cutoff in order to extract trusted k-mers. This tool guarantees high accuracy and speed. This tool has been developed since 21. Jan. 2013 by Euncheon Lim in Prof. Dr. Detlef Weigel's Lab in Max-Planck Institute for Developmental Biology. First of all, you have to install the exact version of...
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  • 7

    PyLogAnalyser

    A Python multiplatform tool to filter, colorise and analyse logs

    PyLogAnalyzer is a tool that receives an input log in black and white, a configuration INI file, which contains the list of rules to process the input, and an output file where to save the results. These rules permit to detect an input line according to a regular expression (regex) or line number range, filter it, pass it, colorise in foreground and background, columnise the groups of the regex and enable or disable the rule. The final goal of this tool is to ameliorate reading long and...
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  • 8
    SummaRE

    SummaRE

    Konversi dini nilai rapor untuk tingkat SMA pengguna K-13.

    SummaRE adalah sebuah aplikasi dini yang berfungsi untuk mengonversi nilai kecil (skala 1 - 4) menjadi nilai besar (1 - 100), serta mengukur kenaikan - kenaikan yang terjadi tiap semesternya untuk tiap mata pelajaran. Tersedia untuk 3 (tiga) peminatan, Matematika dan Ilmu - Ilmu Alam (MIA), Ilmu - Ilmu Sosial (IIS), dan Ilmu - Ilmu Bahasa (IIB).
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  • 9
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  • 10

    jAgg

    jAgg - Java Aggregation Operations

    jAgg is a Java 5.0 API that supports “group by” operations on Lists of Java objects: aggregate operations such as count, sum, max, min, avg, and many more. It supports Super Aggregation: Rollups, Cube, and Grouping Sets. It supports analytic operations such as lag/lead and row number and more. It also allows custom aggregate and analytic operations.
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  • 11
    AEO-Light 1.1

    AEO-Light 1.1

    Version 1.1 is no longer supported.

    Version 1.1 is no longer supported. Please see the new version at https://usc-imi.github.io/aeo-light/ Description for 1.1 continues below: AEO-Light 1.1 is an open-source software application that takes a digital scan of motion picture film with optical sound tracks and directly reproduces the audio, producing as a result a synchronized sound film file. Funded by a grant from the National Endowment for the Humanities and by the University of South Carolina.
    Downloads: 2 This Week
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  • 12
    Reconcile: Web Credibility Evaluation

    Reconcile: Web Credibility Evaluation

    Robust online credibility evaluation of web content

    The goal of the project is the creation of new mechanisms for supporting users in the evaluation of Web content credibility and improvement of the quality of Web content credibility evaluation. Our society increasingly relies on the vast amount of information available on the Internet. As a consequence, the issue of judging or evaluating the credibility of this information becomes of crucial importance. Thus, algorithms and mechanisms for the assessment of credibility of Web content can...
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  • 13
    The Java Data Mining Package (JDMP) is a library that provides methods for analyzing data with the help of machine learning algorithms (e.g. clustering, classification, graphical models, neural networks, Bayesian networks, text processing, optimization).
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  • 14
    Universal Java Matrix Package

    Universal Java Matrix Package

    sparse and dense matrix, linear algebra, visualization, big data

    The Universal Java Matrix Package (UJMP) is an open source Java library which provides sparse and dense matrix classes, as well as a large number of calculations for linear algebra such as matrix multiplication or matrix inverse. Operations such as mean, correlation, standard deviation, replacement of missing values or the calculation of mutual information are supported, too. The Universal Java Matrix Package provides various visualization methods, import and export filters for a large...
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  • 15

    Automalator

    State Dependency deconstructor and mapper for C source code.

    Flowcharts not telling you what you want to know about some C source code? Try a State Dependency map! Every C source file is an implemention of a state machine. Implicit in the definition of a state machine is a network of dependencies between the states. The Automalator * deconstructs the C code into the core state machine * collates the transactions into the dependency net * generates a diagram-format file with the states and dependencies as the nodes and edges. ...
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  • 16
    starrynite is an image analysis tool for tracking fluorescently-labeled nuclei during C. elegans embryogenesis.
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  • 17
    JGAP is a Genetic Algorithms and Genetic Programming package written in Java. It is designed to require minimum effort to use, but is also designed to be highly modular. JGAP features grid functionality and a lot of examples. Many unit tests included. Legal notice/Impressum: Klaus Meffert An der Struth 25 D-65510 Idstein sourceforge <at> klausmeffert.de
    Downloads: 4 This Week
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  • 18
    Virmid

    Virmid

    Virtual Microdissection for SNP calling

    NEWS: 11-07-2013 A new version Virmid 1.1.0 has been uploaded. 08-29-2013 Virmid paper is now published in Genome Biology. Kim S et al, "Virmid: accurate detection of somatic mutations with sample impurity inference", Genome Biology 2013, 14:R90 http://genomebiology.com/2013/14/8/R90/abstract Virmid (Virtual Microdissection for SNP calling) is a Java based variant caller designed for disease-control matched samples. Virmid is also specialized for identifying potential within...
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  • 19
    Adaptive Gaussian Filtering

    Adaptive Gaussian Filtering

    Machine learning with Gaussian kernels.

    Libagf is a machine learning library that includes adaptive kernel density estimators using Gaussian kernels and k-nearest neighbours. Operations include statistical classification, interpolation/non-linear regression and pdf estimation. For statistical classification there is a borders training feature for creating fast and general pre-trained models that nonetheless return the conditional probabilities. Libagf also includes clustering algorithms as well as comparison and validation...
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  • 20
    OCaml interface to FFTW3 -- the Fastest Fourier Transform in the West! (http://www.fftw.org/). The code is developed at https://github.com/Chris00/fftw-ocaml
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  • 21
    VoIP Honey project provides a set of tools for building an entire honeynet, thus includes honeywall and honeypot emulating VoIP environments such as Asterisk PBX or OpenSer with fully configurable connections. Voip Honey runs on GNU/Linux and Windows Systems. It can be compiled for Mac OSX as well.
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  • 22
    Travel Demand Generator
    That project aims at providing a clean API, and the corresponding C++ implementation, able to generate demand for travel solutions (e.g., from JFK to PEK on 25-05-2009) according to characteristics (e.g., Willingness-To-Pay, preferred airline, etc).
    Downloads: 0 This Week
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  • 23
    Lompad

    Lompad

    Metatagging Editor for Learning Object Metadata (IEEE's LOM)

    Lompad is a metatagging tool for learning object. It supports the IEEE-lom spec and SCORM, CANCORE and Normetic profiles. The interface is available in French, English and Spanish Consult the project's Web Site for more information.
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  • 24
    MSP: a 3D flocking boids simulator

    MSP: a 3D flocking boids simulator

    A highly flexible 3D flocking boids simulator, conceived as a tool for

    This project concerns the design and implementation of an open-source flocking boids simulator, designed as a tool to analyze and characterize flock-like collective emerging behaviors. Each boid is conceived as an active agent and modelled by a point-mass approximation. Boid movements in a 3D space are guided by a set of elementary steering behaviors, each implemented as a force acting on the boid's point mass. Each boid is affected by interactions with both the environment and other boids....
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  • 25
    Open Information Integration
    Open Information Integration Tool Suite (Open II) is used by analysts and programmers to accelerate data integration and harmonization across organizations. OpenII has a neutral schema repository for browsing and comparing all sorts of data models. OpenII is built as a Rich Client Platform Application on top of Eclipse 3.x. Developers need to download Eclipse, install the RCP support, the Fatjar plugin and the Delta Pack in one of the 3.x flavors. Release Notes Release Date: Jan...
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