Showing 458 open source projects for "version"

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  • 1

    jAgg

    jAgg - Java Aggregation Operations

    jAgg is a Java 5.0 API that supports “group by” operations on Lists of Java objects: aggregate operations such as count, sum, max, min, avg, and many more. It supports Super Aggregation: Rollups, Cube, and Grouping Sets. It supports analytic operations such as lag/lead and row number and more. It also allows custom aggregate and analytic operations.
    Downloads: 0 This Week
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  • 2
    The Java Data Mining Package (JDMP) is a library that provides methods for analyzing data with the help of machine learning algorithms (e.g. clustering, classification, graphical models, neural networks, Bayesian networks, text processing, optimization).
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  • 3
    Universal Java Matrix Package

    Universal Java Matrix Package

    sparse and dense matrix, linear algebra, visualization, big data

    The Universal Java Matrix Package (UJMP) is an open source Java library which provides sparse and dense matrix classes, as well as a large number of calculations for linear algebra such as matrix multiplication or matrix inverse. Operations such as mean, correlation, standard deviation, replacement of missing values or the calculation of mutual information are supported, too. The Universal Java Matrix Package provides various visualization methods, import and export filters for a large...
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  • 4
    JGAP is a Genetic Algorithms and Genetic Programming package written in Java. It is designed to require minimum effort to use, but is also designed to be highly modular. JGAP features grid functionality and a lot of examples. Many unit tests included. Legal notice/Impressum: Klaus Meffert An der Struth 25 D-65510 Idstein sourceforge <at> klausmeffert.de
    Downloads: 17 This Week
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  • 5
    Virmid

    Virmid

    Virtual Microdissection for SNP calling

    NEWS: 11-07-2013 A new version Virmid 1.1.0 has been uploaded. 08-29-2013 Virmid paper is now published in Genome Biology. Kim S et al, "Virmid: accurate detection of somatic mutations with sample impurity inference", Genome Biology 2013, 14:R90 http://genomebiology.com/2013/14/8/R90/abstract Virmid (Virtual Microdissection for SNP calling) is a Java based variant caller designed for disease-control matched samples.
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  • 6
    Lompad

    Lompad

    Metatagging Editor for Learning Object Metadata (IEEE's LOM)

    Lompad is a metatagging tool for learning object. It supports the IEEE-lom spec and SCORM, CANCORE and Normetic profiles. The interface is available in French, English and Spanish Consult the project's Web Site for more information.
    Downloads: 2 This Week
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  • 7
    Open Information Integration
    ...Developers need to download Eclipse, install the RCP support, the Fatjar plugin and the Delta Pack in one of the 3.x flavors. Release Notes Release Date: Jan 2014 Build Version: 1.0.2666 Notes: 1. Now support for AVRO and HCatalog imports 2. Better support for OWL 3. New OWL and Containing Relationship viewers 4. Added case insensitive option in exact matcher for Harmony
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  • 8
    scipion-xmipp

    scipion-xmipp

    Image processing framework to integrate EM software packages.

    Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated...
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  • 9
    GESPA

    GESPA

    Accurately predicts disease association of single nucleotide mutations

    GESPA (GEnomic Single nucleotide Polymorphism Analyzer) is a bioinformatics tool for classifying Nonsynonymous Single Nucleotide Polymorphisms (nsSNPs). GESPA predicts if a nsSNP is pathogenic using reports from literature and various algorithms to assess conservation in orthologous and paralogous protein alignments. Using reports from literature, GESPA is also able to predict the phenotype of a nsSNP with high accuracy. The software can be used clinically to determine if observed nsSNPs are...
    Downloads: 2 This Week
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  • 10

    ProC 3.0

    smart Workflow Engine

    ProC 3.0 is a scientific workflow engine to build, manage and execute workflows (pipelines) in heterogeneous environments, supporting GRID and other means of parallel processing. It includes a data management component (DMC) to transparently access databases for storage of results and automatically adds metadata to track the processing of data products, so that at every time a full processing history is available. The software was developed and used within the ESA Planck satellite mission.
    Downloads: 0 This Week
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  • 11

    SoNIA (Social Network Image Animator)

    Social Network Image Animator creates animations of network data

    SoNIA (Social Network Image Animator) is a Java-based package for visualizing dynamic or longitudinal network data and rendering it out as animations. The home page with examples is located at http://sonia.stanford.edu Documentation is at https://sourceforge.net/p/sonia/wiki/Main_Page/
    Downloads: 0 This Week
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  • 12

    HRDAG

    Framework for Hierarchical Graph Decomposition

    This is a framework used to decompose hierarchical graphs, i.e.,graphs which were created from or contain a hierarchy of modules. Each module is reused several times in the hierarchy. This may be useful to reverse-engineer human constructs like electronic equipment, manufactured machines, or bureaucratic hierarchies; but also to decompose natural constructs like gene-relation or protein-relation nets.
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  • 13

    Deem

    Analyze time-course data with significance tests, clustering, modeling

    Use statistical methods to analyze time-course data (gene expression microarray and RNA-seq data in particular, but not limited to). Apply significance tests to filter out only significant genes or time series. Cluster time series into similar groups. Generate network models, including linear or non-linear models. Variable selection and optimization routines included. Written in Scala and R. The application is a cross-platform desktop app with a simple GUI and is fully functional...
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  • 14

    Khawas

    An Arabic Corpora Processing Tool

    The new version is available at https://sourceforge.net/projects/ghawwasv4/
    Downloads: 1 This Week
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  • 15
    The BioNLP UIMA Component Repository provides UIMA wrappers for novel and well-known 3rd-party NLP tools used in biomedical text prosessing, such as tokenizers, parsers, named entity taggers, and tools for evaluation.
    Downloads: 0 This Week
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  • 16
    FALCON - Text Search Java Project

    FALCON - Text Search Java Project

    JSON based text search Java Project

    ...Commonly used techniques in this project are Natural Language Processing, Information Extraction and Question-Answering Architecture. ---------------------- - Latest Version - ---------------------- Details of latest version can be found on project website - http://geekdadaji.com --------------------------- - CONTACT DETAILS - --------------------------- CREATOR : SWAPNIL A JADHAV (saj1919) EMAIL ID : dadajibudhau@gmail.com WEBSITE : http://geekdadaji.com LICENSE : CC BY-NC 4.0
    Downloads: 0 This Week
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  • 17
    JinnIde is a plugin that allows using Jinni Prolog, now also hosted here on this site (with open source license!), within the confines of an IDE integrated in JEdit.
    Downloads: 0 This Week
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  • 18
    Weka4OC GUI for Overlapping clustering

    Weka4OC GUI for Overlapping clustering

    Weka4OC: Weka for Overlapping Clustering is a GUI extending WEKA

    This is a GUI application for learning non disjoint groups based on Weka machine learning framework. It offers a variety of learning methods, based on k-means, able to produce overlapping clusters. The application also contains an evaluation framework that calculates several external validation measures. The application offers a visualization tool to discover overlapping groups.
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  • 19
    KMLCSV Converter
    Converts Google Earth KML file to a CSV file, and vice versa. This enables you to plot all custom POIs with Google Earth first before transferring them into your Garmin GPS using the POI Loader.
    Downloads: 27 This Week
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  • 20
    xBook

    xBook

    xBook is a framework for archaeological databases

    xBook is a common framework for several archaeo-related database applications developed and published by Ludwig Maximilian University of Munich. All database applications that are based on the framework (called Books) provide the same basic technical features, but each application can be extended individually. Especially the Synchronisation and the User Rights Management are strong features that allow creating backups and sharing your data to collaborate with other users. The...
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  • 21
    Cuttlefish aims to be a highly extensible visualization and analysis platform for all kinds of network data. IMPORTANT: The Cuttlefish project has been migrated to github: https://github.com/dev-cuttlefish/cuttlefish
    Downloads: 0 This Week
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  • 22

    ktree

    clustering, machine learning, algorithms

    This project has moved to github at http://lmwtree.devries.ninja.
    Downloads: 0 This Week
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  • 23
    Framework for text mining, data integration and data analysis. Keywords: ontology and graph alignment, relation mining, warehouse, semantic database integration, bioinformatics, systems biology, microarray, Java.
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  • 24
    HAWK - PDF Text Search Java Project

    HAWK - PDF Text Search Java Project

    No more support for this project - TAKE A LOOK AT FALCONSEARCH

    No more support for this project - TAKE A LOOK AT FALCONSEARCH "https://sourceforge.net/projects/falcontextsearch/"
    Downloads: 0 This Week
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  • 25

    Texalyzer

    Text analyzer

    Analyzes text document using TF-IDF and optionally stopword list, and extracts important keywords.
    Downloads: 0 This Week
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