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JUDGE (Java Utility for Document Genre Eduction) features automatic classification and clustering of documents, optionally as a webservice.
The program is written entirely in Java and makes use of the Weka machine learning toolkit.
LittleWebStats is an Open Source project written in Java that aims at producing accurate information on Web Site Visitors behavior.
It uses JFreeChart Library for creating the charts.
Niamtool v2 is a graphical drawingtool for creating NIAM-diagrams (Niam is Nijssen Information Analyses Method) As far as we know is the only niam-drawingtool in existance (excluding Niamtool v1). It\'s written in java 1.4.
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TM4 is a suite of applications for managing and analyzing microarray data. TM4 provides data storage and tracking, image analysis, normalization, data filtering, clustering and statistical analysis capabilities. Includes MADAM, Spotfinder, MIDAS, and MeV.
MEASJ, the Multiply Extensible Architecture Simulator in Java, is a Framework for creating Simulations and Emulations of von Neumann architecture based systems.
RISO: distributed, heterogeneous Bayesian belief networks. Belief network: a probability model defined on an acyclic directed graph; distributed: nodes can be on different hosts; and heterogeneous: allowing different types of conditional distributions.
Track This! Hurricane Tracker is Java/Swing based project for weather enthusiasts and the like to help during Hurricane season. I have not seen a solid "free" hurricane tracker yet this is an important piece of software.
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MMOpenGraph is a set of JAVA-Classes to represent graphs within java. It can load and save graphs to serialized or text-based files and analyze graphs to find shortest paths.
A Java package to read and manipulate graphs in the GXL (Graph eXchange Language) format, as well as providing a GXL graph editor. Note from admin: This project is discontinued, send me a message if you want to take over.
MODVLO7 provides an environment for exploring harmonic prolongations in any piece of tonal music. It imports Scala files, and saves Scala files for future changes or study, and for rendering MIDI files in just intonation using Scala.
The class libraries here provide infrastructure for creating simulations of low energy nuclear physics experiments, as well as some useful working programs that do simple simulations and analysis of experiments performed with magnetic spectrographs.
Kaph provides a portable (written in Java) method by which to display and guide users through multiple-subject research surveys. Configuration is handled via XML files. Support for a wide range of types of questions is provided.
ZATreeX is a data manager with two control panels. The difference with conventional data managers is its ability to manage any tree structured data:you just have to implment a java interface. It is also able to extend it functionality (another interface)
Library made with the quantity/formatter pattern. (Currency/CurrencyFormat, Density/DensityFormat, Dimension/DimensionFormat, Distance/DistanceFormat, ElapsedTime/ElapsedTimeFormat, Temperature/TemperatureFormat, Volume/VolumeFormat, Weight/WeightFormat)
Annotated Gel Markup Language is a simple markup language that is being proposed to markup data obtained by 2D gel electrophorosis.The goal of AGML is to enable proteomics research move into the browsing mode of searching through existing databases.
A Java modular system for inquiry people via internet or using PDA. The system lets analize the results via statistic methods and print reports and graphics.
Sequence studio main package provides classes and interfaces for various kinds of sequence alignment. Differently from regular expressions it computes similarity with two initially unknown strings. Project page provides code generating applet.
a cross-platform application to decode, search, browse, view, print, and export TLG/PHI BetaCode texts. Project is currently being ported from wxWindows to Java. (For more info, see the project homepage at http://wxtlg.sourceforge.net)