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MicroArray Genome Imaging and Clustering Tool (MAGIC tool) is a platform-independant java program for analyzing MicroArray data (.tiff scans & .txt godlists) via graphs and clustering operations (including QT-clustering). http://www.bio.davidson.edu/magic
JSpice is a Java Wrapper (using JNI) for the CSpice library provided by NAIF.
Goal of JSpice is to provide a full portable version of CSpice wich is used to calculate geometricals parameters of spatial mission as Cassini/Huygens.
brCluster is a class library, written in java, that implements generic clustering algorithms carefully designed to allow its aplication in any kind of data. The algorithms implemented are K-means and Hierarchical Clustering (Simple and Complete Link).
CloneAnalyzer is a tool for software quality analysis. It allows you to find, display and inspect clones, which are fragments of duplicated source code resulting from lack of proper reuse. It can be used as a plugin for Eclipse and on the command line.
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Celerity, an open-source, Java based data-flow architecture that provides high performance with fine data granuality. Celerity offers a module based programming environment, which can parrellelize across processors, machines and architectures.
Java Randomness Test Suite is a gui application to run randomness tests on random stream resource (file or algorithm). Application can be run in command line. Includes general statistical tests, NIST and DIEHARD tests.
The Naomi project develops an OCL 1.5 interpretation and validation framework. Arbitrary model information is accessed via a model interface. The interface is extended to support OCL constraints on MOF compliant metamodels (e.g. UML metamodels).
VKAS uses genetic programming methods to find out the relationship among a set of independent and dependent variable. It is a problem solver software which uses evolutionary computing methods.
When vkas is run, it creates a population of chromosomes at random. This population is then genetically modified and next population is generated. Each population is subjected to fitness calculation and if a suitable answer chromosome is found then vkas stops and the answer is printed. If a...
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Pödznsatch is a open and distributed hypergoogle of love. It is a semantic web application for social networking, word-of-mouth analysis and profiling. The Pödznsatch architecture includes a bot crawler, an inference engine and a query interface.
A mechanism for identifying, acquiring, transforming, and serving data from multiple geographically diverse, heterogeneous data sets from a common data portal. This work is funded by a NASA Advanced Information Systems Technology (AIST) grant.
Sight provides a friendly interface to create and connect agents for bioinformatics. The workflow supports multiple responses to a single request, structure transforms, filters and request history access.Can talk with ordinary http servers (get and post)
OIM (Online Interview Manager) is a Java application for developing advanced web forms. OIM has a easy GUI for building the forms and for managing users and their answers.
WordFreak is a java-based linguistic annotation tool designed to
support human, and automatic annotation of linguistic data as well as
employ active-learning for human correction of automatically annotated
data.
The "Universal Content Evaluation and Categorisation Software" is a program for analysing a websites, or more generally, a texts content. The text is arranged in dozens of categories, permitting more efficient web searches and information processing.
Graphl is a generic graph visualization and manipulation tool written in Java. Graphl reads and writes RDF files, visualizes them in a flexible and customizeable way and allows users to edit them intuitively. Please see project homepage for more info...
The Annotation Graph Schema API aims to aid developers in the creation and querying
of Annotation bases where the use of XML-based tools is needed. It is easily integratable with any persistent representation and has a flexible in-memory model.
JUDGE (Java Utility for Document Genre Eduction) features automatic classification and clustering of documents, optionally as a webservice.
The program is written entirely in Java and makes use of the Weka machine learning toolkit.
LittleWebStats is an Open Source project written in Java that aims at producing accurate information on Web Site Visitors behavior.
It uses JFreeChart Library for creating the charts.
Pattern recognition system written in Java.
Provide statistical informations about satellite and medical imagery; and also recognize symbols in a gaussian blur.