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A bioinformatics package to analyse ESTs (Expressed Sequence Tags) easily. It contains functionalities of ESTs for EST submission, Batch BLAST and BLAST result parser, etc. easiEST contains JAVA GUI applications for analysing ESTs or other sequences
Scan, the Semantic Content ANnotator, is a semantic pipeline that helps connecting information extraction tools to semantic database. UIMA-based, it allows easy plugin-writing: information extraction, ontology control, store in RDF Repositories.
AliCS is a cognitive software whose main goal is to improve the visibility of information by eliminating the troubles created by the redundancy of symbols.
This project provides bookmarklet-based web page overlays based on recognized terms from vocabulary servers. These overlays can be used to assist users with unfamiliar terminology or can be used for annotation of web-based data and literature.
DiscriAlign implements a novel algorithm that aligns a set of biological interaction networks.It identifies both functionally conserved and dissimilar regions.
Draw 2D: function chart, data points chart, statistical bar chart. It's possible to combine all 3 types of chart into one. This is powerfull and easy tool, as it gives ability to manage many charts parameters. This may often compete with Gnuplot and oth
Provides a GUI interface to grammatical structure and relations (as parsed by the Stanford Parser) of any text.
Contains grammatical relation editor to modify, import, export grammatical relation definitions (tregex patterns and features).
This project focuses on developing geo-visual analytic (GVA) approaches (including both visual and computational methods) to explore spatio-temporal and multivariate patterns (STAMP).
A Java-based tool for creating, designing and distributing graphical trees that represent syntactic construction of sentences. Useful for drawing trees under X-bar generative theory or any other correlated application.
iScore measures the interestingness of news articles in a limited user environment. It is an online learning algorithm that combines a large set of disparate features to classify documents. To download the source code, please use subversion.
TBLTools is a set of GATE processing resources that implements the Fast Transformation Based Learning Algorithm. You can train it to learn rules for NLP tasks such as Named Entity Recognition and Shallow parsing.
The Fiber project seeks to create a modular opensource text mining tool that provides a contextual foundation for analysis in the dissemination of large quantities of text data.
SONIVIS:Tool aims at analysing social (virtual) information spaces like Wikis. These spaces are investigated by using different network definitions (collaboration/information networks). Clustering algorithms and statistiscal analyses are provided.
The application Crimeblips provides up-to-date crime statistics for Berlin (Germany). It maps and visualizes crimes, allowing users to identify crime hot spots, trends and general patterns. Bayesian algorithms are used to extract relevant information.
T-Rex (Trainable Relation Extraction) is a highly configurable machine learning-based Information Extraction from Text framework, which includes tools for document classification, entity extraction and relation extraction.
The EURP OntoLookup is a CREOLE plugin for GATE http://www.gate.ac.uk/ which uses an OWL ontology for lookup. It has a very fast implementation based on a tree of hash maps.
NeuroEvolver is a tool for training and experimenting with one particular kind of recurrent neural networks, namely Long Short-Term Memory networks using an evolutionary learning method.
The Open Context Platform (OCP) is a middleware for building distributed, context-aware applications, is implemented in Java and allows to manage some contextual sources. Manage models ontology written in owl.
RDF-DocMan is a document manager based on a Sesame (RDF repository) backend. Documents are stored in the filesystem and their metadata in a Sesame repository.
It was developed for porQual web content generator (also in sf.net).
A real-time graph plotter. While your application is computing and logging results to a CSV file using the LiveGraph Writer API, the plotter lets you visualise and monitor the results live - by instantly plotting charts and graphs of the data.
The EventStream Experimenter Workbench is a data collection framework with integrated visualization techniques to facilitate eye tracking research. The software currently supports the ASL eye trackers.