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This project houses software to analyze data acquired from electrophysiology experiments. Currently, we have an Octave/MATLAB program to analyze electroneurogram traces of coupled oscillators, and a Perl library for the analysis of voltage trace data
Exploration of a Hierarchical+Functional Approach To Data Organization
This is dedicated to development of a small class for organizing data in both a traditional parent<->child hierarchy and by the functions used to generate child data nodes from parent data. The core of the project is in the class definitions contained within arachne.py, a demonstration of how this method of arranging data can be used to solve a relatively interesting problem may be found in test.py
Echoproc is a piece of scientific analysis software used to extract physical ice sheet characteristics from radio echograms from experiments like the Center for the Remote sensing of ice sheets (https://www.cresis.ku.edu/)
ngram is a module to compute the similarity between two strings. It is different to python's "difflib.SequenceMatcher" in that it cares more about the size of both strings. ngram is an port and extension of the perl module called "String::Trigram
ConDEnSE (Confidential Data Enabled Statistical Exploration) will be a web-based environment for statistical analysis of confidential data from various database sources, based on Plone and R, and using the Jackknife method of confidentiality protection.
A lightweight, browsing-based, 100% Python, federated data integration framework. Users may create custom schemas for disparate sources, query and expand results across sources to find related data; for use in fields such as bioinformatics and datamining
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Design and develop Recommendation and Adaptive Prediction Engines to address eCommerce opportunities. Build a portfolio of engines by creating and porting algorithms from multiple disciplines to a usable form. Try to solve NetFlix and other challenges.
pystats is a comprehensive Python module implementing algorithms for statistics and information theory, including probability distributions, descriptive statistics, analysis of variance, regression, and inference.
Rocksnake takes localities from geological mapping projects and plots them in 2D, over an optional basemap. Each locality has all the standard geology notebook contents and photos attached to it which can then be viewed from Rocksnake.
HORUS is a system for knowledge acquisition, hypothesis generation, inference and learning. It is an interactive, internet environment accessible to a diverse community of users (public-access or membership basis) - see also UMKAILASH project for more.