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Error Correction Module for Illumina Sequencing Reads
...Jan. 2013 by Euncheon Lim in Prof. Dr. Detlef Weigel's Lab in Max-Planck Institute for Developmental Biology.
First of all, you have to install the exact version of boost(>=1.53.0), google sparse hash(>=2.0.2), GCC(>=4.6), autoconf(=2.69), and automake(=1.13).
C++, Matlab and Python library for Hidden-state Conditional Random Fields. Implements 3 algorithms: LDCRF, HCRF and CRF. For Windows and Linux, 32- and 64-bits. Optimized for multi-threading. Works with sparse or dense input features.
KL1p is a portable C++ framework for handling sparse recovery of inverse problems of underdetermined linear systems, like in compressed sensing technique.