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We describe a simple XML format to share text documents and annotation
A minimalist approach to share text documents and data annotations. Allows a large number of different annotations to be represented.
Project files contain:
- simple code to hold/read/write data and perform sample processing.
- BioC-formatted corpora
- BioC tools that work with BioC corpora
BioC goals
- simplicity
- interoperability
- broad use
- reuse
There should be little investment required to learn to use a format or a software module to process that format. ...
program for analyzing and manipulating DNA microarray data
...Direct inspection of the microarray data with the noise-free-cnv software helps to appreciate the quality of the data and to identify artificial calls.
With noise-free-cnv it is possible to visualize individual datasets, to compare different datasets and to perform simple transformations. The visualization and the suppression of genomic waves, the comparison of two datasets by subtraction and the simultaneous inspection of LRR and BAF values are amongst the most frequent applications of this software.
This program is able to read and write files suitable for PennCNV or raw files containing measured values of any kind.
A simple but powerful bulk file statistics calculator. Given operation(s) and a list of files containing identical text fields and corresponding numerical fields this program calculates and outputs a similar file with the numerical op performed.
treecat is a simple, interactive tool that helps you classify files or database entries into an arbitrary category tree. Items are automatically classified within a taxonomy quickly and accurately, requiring single key confirmation or correction.
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