Showing 6 open source projects for "proteomics"

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  • 1
    LP CSIC/UAB Apps and Code

    LP CSIC/UAB Apps and Code

    Software and Code from Laboratori de Proteòmica CSIC/UAB

    Software, Code and Documents from Laboratori de Proteòmica CSIC/UAB ( LP-CSIC/UAB: http://proteomica.uab.cat )
    Downloads: 0 This Week
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  • 2

    ModST

    A tool to search post-translational modifications in a blind mode

    ModST (pronounced as modest) is a tool to search post-translational modifications (PTMs) in mass spectrometry data in an unrestrictive manner. It can search for hundreds of modification without any user provided information for variable modifications. Due to data level parallelization implemented through perl it is fast, portable and easy to use to identify and analyse PTMs in MS/MS data.
    Downloads: 0 This Week
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  • 3
    Python4Proteomics Course

    Python4Proteomics Course

    Python course for Proteomics analysis

    Python course (in Spanish) for Proteomics analysis using basically Jupyter NoteBooks. For more information, you can have a look at the readme.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/p4p/code/ci/default/tree/readme.md
    Downloads: 1 This Week
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  • 4

    MS Data Miner

    MS Data Miner - A web-based proteomics software

    ...The software is described in the following paper: Dyrlund TF, Poulsen ET, Scavenius C, Sanggaard KW, Enghild JJ. MS Data Miner: A web-based software tool to analyze, compare and share mass spectrometry protein identifications. PROTEOMICS 2012 http://www.ncbi.nlm.nih.gov/pubmed/22833312
    Downloads: 0 This Week
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  • 5
    Tools for mass spectrometry, especially for protein mass spectrometry and proteomics: Quantification tools, converters for Applied Biosystems (Q Star and Q Trap), calculation of in-silico fragmentation spectra, converter for Mascot result files
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    Downloads: 0 This Week
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  • 6
    Annotated Gel Markup Language is a simple markup language that is being proposed to markup data obtained by 2D gel electrophorosis.The goal of AGML is to enable proteomics research move into the browsing mode of searching through existing databases.
    Downloads: 0 This Week
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