F-Tracker3D
A software tool for tracking fluorescent cells in 3D
...First, each single cell is tracked in 2D by using the maximum intensity projections of the z-stacks and CellTracker, the free open source software available at: www.celltracker.website. Then, the 3D track of each cell is obtained analysing the z-stacks and looking for the z-plane with the maximum intensity value for the different x-y positions previously determined.
F-Tracker3D is written in MATLAB (©, The MathWorks, Inc., Massachusetts, USA) and the source code is freely provided.
Requirements: MATLAB 2015a and Image Processing Toolbox 9.2 or later versions.