Showing 69 open source projects for "data processing"

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  • 1

    MDPP

    The Biozentrum Micrograph Data Processing Program (MDPP)

    MDPP is an image processing package designed for micrograph data. It contains program to process data in a number of ways including many averaging methods, statistical methods and reconstruction schemes. The programs are not limited to micrograph data of course, but can be applied to images of all types.
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  • 2

    MatQuantify

    An image processing tool

    MatQuantify, written in MATLAB, detects both large-scale and subtle structural changes in the spindle or DNA and can be used to statistically compare the effects of different treatments. MatQuantify can quantify various physical properties extracted from fluorescence microscopy images, such as area, lengths of various components, perimeter, eccentricity, fractal dimension, satellite objects and orientation. It can also measure textual properties including entropy, intensities and the...
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  • 3
    composight
    Composight is a cross-platform toolkit for 3D-image processing in the domain of composite materials science. It is written in C++ and provides small, problem-specific applications for viewing, filtering and segmentation of volumetric data such as micro-CT scans. The main objective is not to provide yet another complex application for volume data visualization and medical image processing.
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  • 4
    TESTIMAGES

    TESTIMAGES

    Testing images for scientific purposes

    ...Please cite the following papers when using any image in this archive: * ASUNI N, GIACHETTI A, "TESTIMAGES: A Large Data Archive For Display and Algorithm Testing", Journal of Graphics Tools, Volume 17, Issue 4, 2015, pages 113-125, DOI:10.1080/2165347X.2015.1024298 * ASUNI N, GIACHETTI A, "TESTIMAGES: a large-scale archive for testing visual devices and basic image processing algorithms", STAG - Smart Tools & Apps for Graphics Conference, 2014.
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    Downloads: 126 This Week
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  • 5
    An IDE for people interested in Machine Vision/Image Processing. Written in Java, using JAI. It allows users to view image data and also provides a drag and drop environment that users can create/execute graphs of JAI operators.
    Downloads: 1 This Week
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  • 6
    tracking.js

    tracking.js

    A modern approach for Computer Vision on the web

    The tracking.js library brings different computer vision algorithms and techniques into the browser environment. By using modern HTML5 specifications, we enable you to do real-time color tracking, face detection and much more, all that with a lightweight core (~7 KB) and intuitive interface. To get started, download the project. This project includes all of the tracking.js examples, source code dependencies you'll need to get started. Unzip the project somewhere on your local drive. The...
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  • 7
    TraceX

    TraceX

    MatLab App for calculating fitting isotopic exchange profile data

    MatLab App for calculating fitting isotopic exchange profile data. Developed for measuring self-diffusivity and effective surface exchange coefficient of ion conducting materials. Requires MatLab image processing toolbox If you use this tool for you research, please cite my PhD thesis: Cooper, S. J. Quantifying the Transport Properties of Solid Oxide Fuel Cell Electrodes. (Imperial College London, 2015).
    Downloads: 2 This Week
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  • 8
    Gimias

    Gimias

    Graphical Interface for Medical Image Analysis and Simulation

    GIMIAS is a workflow-oriented environment for solving advanced biomedical image computing and individualized simulation problems, which is extensible through the development of problem-specific plug-ins. In addition, GIMIAS provides an open source framework for efficient development of research and clinical software prototypes integrating contributions from the Physiome community while allowing business-friendly technology transfer and commercial product development.
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  • 9

    Zebrafish Image Processing

    Software collection for zebrafish image processing

    Software collection for zebrafish image processing (under construction), including an Excel table for related tools and method papers, see also survey paper: Mikut, R.; Dickmeis, T.; Driever, W.; Geurts, P.; Hamprecht, F.; Kausler, B. X.; Ledesma-Carbayo, M. J.; Marée, R.; Mikula, K.; Pantazis, P.; Ronneberger, O.; Santos, A.; Stotzka, R.; Strähle, U. & Peyriéras, N. Automated Processing of Zebrafish Imaging Data - A Survey Zebrafish, 2013
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  • 10
    Open Cezeri Library

    Open Cezeri Library

    Effective Linear Algebra and Computer Vision Library with JAVA

    OCL stands for Open Cezeri Library (yet another linear algebra and matrix library). This library provides rapid coding as matlab ease of use. To learn for library please try to use test examples at OpenCezeriLibrary\test\test. It is originally developed at el-cezeri laboratory of Siirt University, in order to establish generic framework of reusable components and software tools for machine vision, machine learning, AI and robotic applications. Currently, it holds following main concepts 1-...
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  • 11
    Tigris is an open source suite of classes and programs implemented in C++ for single particle electron microscopic image processing.
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  • 12
    Fiji is an image processing package based on ImageJ.
    Downloads: 2 This Week
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  • 13
    FreeROI
    FreeROI is a versatile image processing software developed for neuroimaging data. Its goal is to provide a user-friendly interface for neuroimaging researchers to visualize and analyze their data, especially in defining region of interest (ROI) for ROI analysis.
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  • 14
    xmipp

    xmipp

    Image processing suite for Electron Microscopy

    XMIPP is an image processing suite for 3D-reconstruction of biological specimens from transmission electron microscopy data. NOTE that stable releases (including binaries) are longer stored at Sourceforge, but are available at http://xmipp.cnb.csic.es
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  • 15

    flow visualization toolbox

    matlab 2D image processing GUI toolbox for flow visualization

    ...Zhong @ the University of Manchester's supervision, guidance and support. Both GUI and command line interface are provided for newbie and advanced user. Image can be processed into contour image, matlab mat and tecplot data. This toolbox can be conveniently extended for 2D image processing in other disciplines, for example, surface stress measurement, inferred thermograph, PIV. See developer guide for HOWTO. * example project.mat and calib.mat use abs path will not work for you directly. pl. rebuild yours according to my youtube tutorial
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  • 16
    OpenCMISS-Zinc

    OpenCMISS-Zinc

    A Library for Interactive Modelling and Visualisation

    ...Models are represented in Zinc as mathematical fields defined over domains, including finite elements with support for high-order basis functions, complex parameter mappings and time variation, and image-based fields. Further fields can be defined by mathematical expressions and algorithms on existing fields, including image processing filters. Zinc model data structures are dynamic, supporting interactive applications which programmatically create, destroy and modify parts of models.
    Downloads: 12 This Week
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  • 17

    AlgART Java Libraries

    Open source library for processing arrays and matrices

    AlgART Java libraries for processing arrays and matrices are open-source product, distributed under MIT license. So, anyone can use them for free without any restrictions. Main features: 63-bit addressing of array elements (64-bit long int indexes), memory model concept (allowing storing data in different schemes from RAM to mapped disk files), wide usage of lazy evaluations, built-in multithreading optimization for multi-core processors, wide set of image processing algorithms over matrices, etc. - please see at the site. ...
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  • 18
    LAVA for AFM

    LAVA for AFM

    Lloyd's Algorithm-based Volumetric Analysis for AFM Images

    This MATLAB-based program enables analysis of AFM images. In particular, it allows the user to measure the volume of all distinguishable features in an image and to isolate and sort those particles. As the name implies, LAVA uses Lloyd's Algorithm, also known as k-means sorting, to identify a small set of volumes representative of the actual distribution of particle in the image. Although developed for determining feature volume, LAVA is also completely compatible with other types of...
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  • 19
    Medical Data Segmentation Toolkit
    MDSTk is a collection of 2D/3D image processing tools aimed at medical images. It contains routines for volume data processing (3D filtering, segmentation, etc.) as well as fast low-level vector graphics library for surface and tetrahedral meshing. MDSTk has been forked by 3Dim Laboratory s.r.o. to provide better support and further push its development forward. Please check VPL (Voxel Processing Library) project available on Bitbucket (https://bitbucket.org/3dimlab/vpl).
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    Downloads: 3 This Week
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  • 20
    Malimpa stands for MAtlab Library for IMage Processing and Analysis. It provides functions for 2D/3D grascale/color image creation, filtering, or measurement. It requires, and complements Matlab Image Processing Toolbox. Important notice: the project is now hosted in GitHub, https://github.com/dlegland/matImage
    Downloads: 0 This Week
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  • 21
    QVision: Computer Vision Library for Qt

    QVision: Computer Vision Library for Qt

    Computer vision and image processing library for Qt.

    This library contains among other things a set of graphical widgets for video output, performance evaluation and augmented reality. The library also provides classes for several data types usually required by computer vision and image processing applications such as vectors, matrices, quaternions and images. Thanks to a large number of wrapper functions these objects can be used with highly efficient functionality from third party libraries such as OpenCV, GNU Scientific Library, Computational Geometry Algorithms Library, Intel's Math Kernel Library and Integrated Performance Primitives, the Octave library, etc...
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  • 22

    EMGU Face Recognition

    Using EMGU to perform Principle Component Analysis (PCA)

    This article is designed to be the first in several to explain the use of the EMGU image processing wrapper. For more information on the EMGU wrapper please visit the EMGU website. You will start with 3 warnings for the references not being found. Expand the References folder within the solution explorer delete the 3 with yellow warning icons and Add fresh references to them. Face Recognition has always been a popular subject for image processing and this article builds upon the good work by Sergio Andrés Gutiérrez Rojas and his original article (codeproject). ...
    Downloads: 2 This Week
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  • 23

    connhim2000

    image processing, open e-commerce, enterprise information systems

    An efficient program to reduce black and white scanned image size for internet usage. I have implemented some filters which reduce the image size while still maintain logical data from black and white scanned images. Free and opensource for General Public use.
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  • 24

    StereoWS

    StereoWS developed by UCL-MSSL within the ProVisG project

    ...In addition, a part of software (called StView ver.1.0) was ported to a web-based GIS system (e.g., ProGIS) and ProVIP as a solution for stereo visualisation. Apart from the stereo visualisation, some useful stereo tools (e.g., stereo matcher or stereo image processing tools) have been extracted from UCL’s previous development for HRSC data processing, and modified for close-range stereo imagery.
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  • 25

    EMGU Kalman Filter

    Kalman Filter for EMGU Image Processing Applications

    The Kalman filter is an algorithm which operates recursively on streams of noisy input data to produce a statistically optimal estimate of the underlying system state (Original Paper). The filter is named for Rudolf (Rudy) E. Kálmán, one of the primary developers of its theory. More information is available at Wikipedia, the Kalmn Filter was derived to solve the Wiener filter problem. The Wiener filter problem is to reduce the amount of noise present in a signal by comparison with an...
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