Update: A graphical user interface for RootAnalyzer, along with other root phenotyping tools can now be found at https://sourceforge.net/projects/rootphenotypingsuite/
RootAnalyzer is a fully automated tool, for efficiently extracting and analyzing anatomical traits from root cross section images. Using a range of image processing techniques such as local thresholding and nearest neighbor identification, RootAnalyzer segments the plant root from the image's background, classifies and...