Showing 44 open source projects for "python data analysis"

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  • 1
    scipion-xmipp

    scipion-xmipp

    Image processing framework to integrate EM software packages.

    Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated...
    Downloads: 0 This Week
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  • 2
    xmipp

    xmipp

    Image processing suite for Electron Microscopy

    XMIPP is an image processing suite for 3D-reconstruction of biological specimens from transmission electron microscopy data. NOTE that stable releases (including binaries) are longer stored at Sourceforge, but are available at http://xmipp.cnb.csic.es
    Downloads: 0 This Week
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  • 3
    MatrixUser

    MatrixUser

    A Multi-functional GUI-based Program for Image Processing and Analysis

    ... or tailored for processing two-dimensional matrix. The MatrixUser is a software package which features functions designed and optimized specifically for manipulating multidimensional real or complex data matrix. MatrixUser provides a nice graphical environment for easily performing image analysis tasks including multidimensional image display, matrix (image stack) processing and rendering etc. MatrixUser is a great lightweight tool for users who are working in image processing field under Matlab.
    Downloads: 2 This Week
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  • 4
    OpenCMISS-Zinc

    OpenCMISS-Zinc

    A Library for Interactive Modelling and Visualisation

    ... filters. Zinc model data structures are dynamic, supporting interactive applications which programmatically create, destroy and modify parts of models.
    Downloads: 3 This Week
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  • 5
    allink

    allink

    Software for data analysis, image processing, simulations, solver.

    ... the operation of Matematica on different sets of data visualized on a Qt graphical interface. DrImage) image manipulation on the Matematica filters. The program is intended to use as less as possible external libs (optional: openGL, gsl, fftw, cgal, png, tiff, boost, MPI, Qt...).
    Downloads: 0 This Week
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  • 6
    LAVA for AFM

    LAVA for AFM

    Lloyd's Algorithm-based Volumetric Analysis for AFM Images

    This MATLAB-based program enables analysis of AFM images. In particular, it allows the user to measure the volume of all distinguishable features in an image and to isolate and sort those particles. As the name implies, LAVA uses Lloyd's Algorithm, also known as k-means sorting, to identify a small set of volumes representative of the actual distribution of particle in the image. Although developed for determining feature volume, LAVA is also completely compatible with other types of image...
    Downloads: 3 This Week
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  • 7
    Malimpa stands for MAtlab Library for IMage Processing and Analysis. It provides functions for 2D/3D grascale/color image creation, filtering, or measurement. It requires, and complements Matlab Image Processing Toolbox. Important notice: the project is now hosted in GitHub, https://github.com/dlegland/matImage
    Downloads: 1 This Week
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  • 8

    EMGU Face Recognition

    Using EMGU to perform Principle Component Analysis (PCA)

    ... by Sergio Andrés Gutiérrez Rojas and his original article (codeproject). The reason that face recognition is so popular is not only it’s real world application but also the common use of principle component analysis (PCA). PCA is an ideal method for recognising statistical patterns in data. The popularity of face recognition is the fact a user can apply a method easily and see if it is working without needing to know to much about how the process is working.
    Downloads: 1 This Week
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  • 9

    FluoJ

    Fluorescence microscopy image analysis tool

    Fluorescence microscopy became a common tool in cell and molecular biology. Image analysis of fluorescent molecules provides key information about the location, interactions, and dynamic behavior of target molecules. Usually user needs to recognize, characterize and classify particles, and in many cases to do statistical inferences from data collected. FluoJ is a software tool to automate many of these steps. We used it to measure sperm quality, cells movement, virus infection in plants...
    Downloads: 0 This Week
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  • 10
    Pink is an image processing library developed at ESIEE Engineering for research and teaching purposes. It contains implementations of over 200 algorithms for image segmentation and filtering.
    Downloads: 1 This Week
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  • 11
    PIAF (Prototype Image Applications Fast) is a prototyping tool for helping development of image processing algorithms. Based on a Qt GUI, it can display and process several live video inputs or still images with a plugins based architecture.
    Downloads: 0 This Week
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  • 12
    phpCollect aims to quickly and easily graph, record, and display statistical host data.
    Downloads: 1 This Week
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  • 13
    VIPS is an image processing suite designed for extremely large images and colorimetry. It consists of a powerful re-usable library and a graphical user interface. http://www.vips.ecs.soton.ac.uk
    Downloads: 0 This Week
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  • 14
    jIR is an open source project focused on building an open platform for image processing tasks. It is composed of individual algorithms whose task is to extract or compare information in a data set of images.
    Downloads: 0 This Week
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  • 15
    LeafAnalyser has been developed as a fast throughput leaf shape analysis application. It contains features such as automated image processing, data analysis and interactive 2D/3D graphs.
    Downloads: 2 This Week
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  • 16
    MIVF - Medical Imaging and Visualization Factory, is a framework for medical applications. It supplies a platform, in which image processing and 3D visualization algorithms can be employed as reusable components (functional modules or plugins).
    Downloads: 0 This Week
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  • 17
    UIMP(Unified Image Manipulation Program) is an OS independent Image Processing system, which provides over 1000 algorithms and supports web online, console and GUI program.
    Downloads: 0 This Week
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  • 18
    Downloads: 0 This Week
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  • 19

    geoscipy

    Python-accessible toolkit for Geoscience & Remote Sensing Applications

    GeoSciPy is a set of C and Python functions that provide an API for all aspects of Geoscience and Remote Sensing Applications. Functions include reading/writing of many data formats, images, vectors, ..., and processing of images, vectors, ... including map projections, ... The library is written C, using HDF5 as the file format for storage of all remotely-sensed data and ancillary data, as well as processed data. The C functions assume a particular format for the HDF5 file contents...
    Downloads: 0 This Week
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