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Maldonado E, Almeida D, Escalona T, Khan I, Vasconcelos V and Antunes A (2016) LMAP: Lightweight Multigene Analyses in PAML. BMC Bioinformatics, 17:354. doi: https://doi.org/10.1186/s12859-016-1204-5

Maldonado E, Sunagar K, Almeida D, Vasconcelos V, Antunes A (2014) IMPACT_S: Integrated Multiprogram Platform to Analyze and Combine Tests of Selection. PLoS ONE 9(10): e96243. doi: https://doi.org/10.1371/journal.pone.0096243

Cotovía is a unit-selection text-to-speech system for Galician and Spanish. Cotovía is distributed under the GPL3.0+ license, but each of the avaliable speaker voices has its own license. The speakers available at sourceforge are free for commercial and non-commercial uses. Another speaker, free for non-commercial uses, is avaliable through external links (see the Blog section). Cotovia has been developed by the University de Vigo and the center 'Ramón Piñeiro' for Research in Humanities,...

Maldonado E, Khan I, Philip S, Vasconcelos V, Antunes A (2013) EASER: Ensembl Easy Sequence Retriever. Evolutionary Bioinformatics, 9:487-490. doi: https://doi.org/10.4137/EBO.S11335.

...This can be used with either the left or right hand (or a chorder can be used for each hand, effectively doubling the typing speed). SpiffChorder hardware is based on Atmel AVR ATmega168, using Objective Development's V-USB (a software-only implementation of a low-speed USB device).

...Makes use of several known bioinformatics software. IMPACT is free software, targeted to the scientific community. Maldonado E, Dutheil JY, da Fonseca RR, Vasconcelos V, Antunes A (2011) IMPACT: Integrated Multiprogram Platform for Analyses in ConTest. Journal of Heredity, 102 (3): 366-369. doi: https://doi.org/10.1093/jhered/esr003

PROJECT HAS MOVED! ROS is now hosted at https://code.ros.org/gf/project/ros/

Convert copy. Pipes existing converter tools together to convert files from a format to another. E.g. add the converters 'pdf -> text' and 'text -> wav' and you can convert pdf to wav. Automatically installs missing converters in Debian.

Network Visualization is a mature part of computer science that is enjoying a good deal of growth, partially fueled by Bioinformatics. Network is a synonym for Graph, and both refer to a collection of nodes and edges.