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Over 1,000,000 page views per month. Jmol/JSmol is a molecular viewer for 3D chemical structures that runs in four independent modes: an HTML5-only web application utilizing jQuery, a Java applet, a stand-alone Java program (Jmol.jar), and a "headless" server-side component (JmolData.jar). Jmol can read many file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other...

JSmol is the extension of the Java-based molecular visualization applet Jmol (jmol.sourceforge.net) as an HTML5 JavaScript-only web app. It can be used in conjunction with the Java applet to provide an alternative to Java when the platform does not support that (iPhone/iPad) or does not support applets (Android). Used in conjunction with the Jmol JavaScript Object (http://wiki.jmol.org/index.php/Jmol_Javascript_Object), JSmol seamlessly offers alternatives to Java on these non-Applet...

pano3 (or "pano cube") is an experimental, cross-platform, open source toolkit designed to agree with modern web standards such as HTML5, CSS3 and CSS3D. The pano3 viewer is now released as a jQuery plug-in based on 3d transformations supported by CSS3D. The desktop utilities are written in Java 1.7.

An extension of GWTCanvas widget to allow leveraging all of the features of the HTML 5 canvas element, like drawing text and shadows. Depends on browser support for the canvas element. See project home page link for usage details.