Search Results for "image analysis"
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Showing 137 open source projects for "image analysis"
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SimpleITK
A layer built on top of the Insight Toolkit (ITK)
SimpleITK is an image analysis toolkit with a large number of components supporting general filtering operations, image segmentation and registration. It is built on top of the Insight Segmentation and Registration Toolkit ITK with the intent of providing a simplified interface to ITK. SimpleITK itself is written in C++ but is available for a large number of programming languages. -
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Blender GIS
Blender addons to make the bridge between Blender and geographic data
Import in Blender most commons GIS data format, Shapefile vector, raster image, geotiff DEM, OpenStreetMap XML. There are a lot of possibilities to create a 3D terrain from geographic data with BlenderGIS, check the Flowchart to have an overview. Display dynamics web maps inside Blender 3d view, requests for OpenStreetMap data (buildings, roads, etc.), get true elevation data from the NASA SRTM mission. Manage georeferencing information of a scene, compute a terrain mesh by Delaunay triangulation, drop objects on a terrain mesh, make terrain analysis using shader nodes, set up new cameras from geotagged photos, set up a camera to render with Blender a new georeferenced raster. -
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iCn3D
Web-based protein structure viewer and analysis tool
"I see in 3D" (iCn3D) Structure Viewer is not only a web-based 3D viewer, but also a structure analysis tool interactively or in the batch mode using NodeJS scripts based on the npm package icn3d. iCn3D synchronizes the display of 3D structure, 2D interaction, and 1D sequences and annotations. Users' custom displays can be saved in a short URL or a PNG image. The complete package of iCn3D including Three.js and jQuery is in the directory "dist" after you get the source code with the "Code" button. ... -
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Image Assemble Tool
A powerful tool designed to reconstruct an original image from pieces
Image Assemble Tool is a powerful tool designed to reconstruct an original image from fragmented pieces by analyzing the edge pixels of each piece. The program intelligently determines the correct placement of each fragment to recreate the complete image with precision. With its intuitive interface and efficient algorithms, Image Assemble Tool is an ideal tool for anyone needing to reconstruct images from scattered pieces. Download now and bring your fragmented images back to life! -
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ShinyCardinal
Mass spectrometry imaging data analysis software tool
ShinyCardinal is an open-source and vendor-neutral software that covers all steps in MSI data analysis. It leverages the R package Cardinal to enhance its functionalities by introducing several additional important features, such as the removal of background noises and matrix peaks, deisotoping, absolute quantification, network analysis, and metabolite identification. ShinyCardinal is built as a desktop application with a conveniently designed graphic user interface to provide users a... -
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An easy to use Java program that allows you to digitize data points off of scanned plots, scaled drawings, or orthographic photographs. Includes an automatic digitization feature that can automatically digitize many types of functional data.
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WingSegment
WingSegment: A tool for Analysis and Modeling of Insect Wings
WingSegment is a MATLAB app-designed tool employing a hybrid approach of computer vision and graph theory for precise insect wing image segmentation. WingSegment detects cells, junctions, Pterostigma, and venation patterns, measuring geometric features and generating Voronoi patterns. The tool utilizes region-growing, thinning, and Dijkstra's algorithms for boundary detection, junction identification, and vein path extraction. It provides histograms and box plots of geometric features, facilitating comprehensive wing analysis. ... -
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ProStack
ProStack - a platform for image processing and analysis
ProStack - a platform for image processing and analysis. It implements various image processing methods as separate modules, that can be joined in a complex image processing scenario by use of a graphical user interface. RPMs are available at https://build.opensuse.org/project/repositories/home:mackoel:compbio -
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SMILI
Scientific Visualisation Made Easy
The Simple Medical Imaging Library Interface (SMILI), pronounced 'smilie', is an open-source, light-weight and easy-to-use medical imaging viewer and library for all major operating systems. The main sMILX application features for viewing n-D images, vector images, DICOMs, anonymizing, shape analysis and models/surfaces with easy drag and drop functions. It also features a number of standard processing algorithms for smoothing, thresholding, masking etc. images and models, both with graphical user interfaces and/or via the command-line. See our YouTube channel for tutorial videos via the homepage. The applications are all built out of a uniform user-interface framework that provides a very high level (Qt) interface to powerful image processing and scientific visualisation algorithms from the Insight Toolkit (ITK) and Visualisation Toolkit (VTK). ... -
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CT4AM
Tools for 3D image analysis of additively manufactured parts
...Moreover, data analysis and processing of G-code are key assets of the project. The main objective is not to provide yet another complex application for volume data visualization and medical image processing. Instead, CT4AM is a collection of small and simple apps that have already been successfully used to solve various problems in materials science and process visualization. -
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NEtCAT NanoSurface Analyzer
NanoSurface Analyzertool is designed for the STM image analysis
NanoSurface Analyzer tool is designed for the analysis and measurement of surface data at the nanoscale. This application is developed to support researchers working with surface data by providing tools for reading, processing, and analyzing data. -
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Shutter Encoder
Free professional video converter Windows|Mac|Linux
Shutter Encoder is an video, audio and image converter based on FFmpeg and other great tools. It has been designed by video editors in order to be as accessible and efficient as possible. It's a swiss knife tool for any video editor. Link to website & downloads : https://www.shutterencoder.com - Without conversion: Cut without re-encoding, Replace audio, Rewrap, Conform, Merge, Extract, Subtitling, Video inserts - Sound conversions: WAV, AIFF, FLAC, ALAC, MP3, AAC, AC3, OPUS, OGG - Editing codecs: DNxHD, DNxHR, Apple ProRes, QT Animation, GoPro CineForm, Uncompressed YUV - Output codecs: H.264, H.265, VP8, VP9, AV1, OGV - Broadcast codecs: XDCAM HD422, AVC-Intra 100, XAVC, HAP - Old codecs: DV PAL, MJPEG, Xvid, WMV, MPEG - Archiving codec: FFV1 - Images creation: JPEG, Image - Burn & Rip: DVD, Blu-ray, DVD RIP - Analysis: Loudness & True Peak, Audio normalization, Cut detection, Black detection, Media, VMAF - Download: Web video -
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Tulip is an information visualization framework dedicated to the analysis and visualization of relational data. Tulip aims to provide the developer/user with a complete library/software, supporting the design of interactive information visualization
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qvge
Qt Visual Graph Editor
qvge is a multiplatform graph editor written in C++/Qt. Its main goal is to make possible visually edit two-dimensional graphs in a simple and intuitive way. Please note that qvge is not a replacement for such a software like Gephi, Graphvis, Dot, yEd, Dia and so on. It is neither a tool for "big data analysis" nor a math application. It is really just a simple graph editor :) -
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openSkyMatch
Matches OpenScience Observatories images with astronomical catalogs
openSkyMatch is a collection of Linux shell and Python scripts designed for the OpenScience Observatories program. It automates the identification and matching of detected celestial objects in locally captured FITS images with entries in large-scale sky catalogs, notably Pan-STARRS1 DR2 (II/389/ps1_dr2). The toolkit supports data preprocessing, coordinate correlation, and catalog-based validation of astronomical detections. All tools are open-source and optimized for reproducibility and... -
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The Scientific Image Analysis (SIA) software is an image processing application written in MATLAB for scientific analysis of images and video. SIA is designed to be intuitive and easy to use, and is free to download. While SIA is designed to meet the image processing needs of biologists, its functionalities can be used for a wide variety of applications.
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RasterPS
Basic Digital Image Improvement and Processing
RasterPS allows to process digital Images. The common Image File Formats are supported. Fundamental Functions like Histogram, Conversion, Point Operations, Filtering, geometric Transformations and Image Analysis are implemented. A basic Image Manager retrieves file attributes from digital images. -
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GXSM
Scanning Probe Microscopy Controller and Data Visualization Software
GXSM -- Gnome X Scanning Microscopy: A multi-channel image and vector-probe data acquisition and visualization system designed for SPM techniques (STM,AFM..), but also SPA-LEED/LEED/LEEM data analysis. A plug-in interface allows any user add-on data-processing and special hardware and instrument support. Latest: NC-AFM and related explorative methods as SQDM can be configured. High-Speed external PAC-PLL hardware option with digital DSP link. -
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FibroSoft
Histology staining analysis and quantification tool.
A histology staining analysis and quantification tool based on machine learning. -
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GPLIGC is a program for analysis and 3D visualization of GPS tracklogs (in igc format) as recorded by flight data recorders used by glider pilots.
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gml4gtk
small console GML or graphviz DOT graph viewer
directed graph layout program for GML (Graph-Markup-Language) graph or partial graphviz DOT graph -
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medical image analysis
Libraries and command line tools for medical image processing.
This software provides libraries and command line tools for the processing and analysis of gray scale medical images. -
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Screen Capture Image Text App Launcher
Run defined applications by detecting text in a captured screenshot
This application requires the "TESSERACT" OCR engine to decode text in a captured screenshot. The text file can be analysed to look for specific trigger words which will run a defined application. TESSERACT OCR is available for Windows users here: https://digi.bib.uni-mannheim.de/tesseract/ Information on its use is generally available, this medium post provides an overview: https://medium.com/quantrium-tech/installing-and-using-tesseract-4-on-windows-10-4f7930313f82 During the... -
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ANDTool
Analysis Nuclei DAB (AND) Tool
Analysis Nuclei DAB (AND) Tool is a Graphical User Interface (GUI) to analyse microscopy images representing cells with nuclei stained using DAB dyes. The tool requires as input the original RGB images, and the FastRed, FastBlue, DAB channel, easily obtained using the Fiji function: "ImageJ" -> "Image" -> "Colour Deconvolution" -> "FastRed FastBlue DAB" Then, the tool first segment the nuclei using the FastBlue channel and the DAB channel, and then computes statistics by subdividing the sample in three regions according to the FastRed channel: a dark-red ROI, a light-pink ROI and a white ROI. ... -
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LTI-Lib is an object oriented computer vision library written in C++ for Windows/MS-VC++ and Linux/gcc. It provides lots of functionality to solve mathematical problems, many image processing algorithms, some classification tools and much more...
