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JGAP is a Genetic Algorithms and Genetic Programming package written in Java. It is designed to require minimum effort to use, but is also designed to be highly modular. JGAP features grid functionality and a lot of examples. Many unit tests included.
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Klaus Meffert
An der Struth 25
D-65510 Idstein
sourceforge <at> klausmeffert.de
quadGT is a software package for the joint genotyping of two parents, child’s normal genome and child’s tumor genome based on sequencing reads aligned to a reference genome.
This library is a lightweight implementation of genetic algorithm, contains the most popular types of chromosomes and the basic algorithms for selection, elitism, crossing and mutation.
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compactpath is a python package to handle compacting of filepaths. compacting of filepaths may be useful in gui programming where filepaths of arbitrary lenght have to be displayed in widgets with limited visual space.
The SBMLevolver is an evolutionary algorithm package that creates SBML models with user-specified properties and behaviour from a given set of building blocks. Applications lie in network reconstruction and synthetic biology.