The 'ImageJ Plugins' project is a source of custom plugins for the Image/J software. Image/J is a public domain image processing and analysis program developed in Java (http://rsb.info.nih.gov/ij/).
Dicom PACS solution for free.
DCMLinux is a complete PACS system, free of charge. Its core is an Ubuntu 14.04 system fully updated and it contains the DCM4CHEE as its PACS server. In the near future it will contain many other addons such as Weasis, Oviyam, Care2x, etc. Just download the iso, burn it to a CD and boot it up. No need to configure any files of dcm4chee, DCMLinux installer asks for everything it needs to configure a running PACS in minutes. Project Wiki : http://wiki.dcmlinux.org Project Forums: http://forums.dcmlinux.org
Use Apache Pig to process your large sequencing datasets!
SeqPig is a library for Apache Pig for the distributed analysis of large sequencing datasets. It provides import and export functions for file formats commonly used for sequencing data, as well as a collection of Pig user-defined-functions (UDF’s) to help process aligned and unaligned sequence data. Currently SeqPig supports BAM/SAM, FastQ and Qseq input and output. For more information see the manual at http://seqpig.sourceforge.net/
A clinical Decision Support System for Diagnosis of Allergic Rhinitis
A Clinical Decision Support System (CDSS) can be used for diagnosing allergic disorders. CDSS with rule based classification approaches, aid junior doctors and clinicians to diagnose and make reliable decisions. The results of an intradermal skin test is the input to the CDSS. The System predicts the presence or absence of ALLERGIC RHINITIS. The system is tailored to suit to the common allergens (inhalents and ingestants) prevalent in Chennai, South India. Intradermal Skin Test(IDST)data were collected from 872 patients who visited the Good Samaritan Kilpauk Lab and Allergy Testing Centre, Chennai, Tamilnadu, India.
This project holds an implementation of the Cross-Enterprise Document Sharing (XDS) profile as defined by IHE (ihe.net). It includes implementations of both the Document Registry and Document Repository actors.
Medical Image Registration Library
SimpleElastix is an extension of SimpleITK that comes with the elastix C++ image registration library. This makes state-of-the-art medical image registration really easy to do in languages like Python, Java, C# and R.
Myoelectrically Controlled Functional Electrical Stimulation
The objective of this project is to develop and promote a method for restoring motor function lost due to upper motor neuron lesion (spinal cord injury, stroke) in a way that the user has direct control over the movement. When a muscle contracts it is causing a weak electrical signal that can be measured on the skin over the muscle- even if the muscle is almost completely paralysed (paretic). At the same time the muscle can be electrically stimulated to contract. Combining these two principles the muscle can directly boost itself to obtain a greater amount of contraction. The project wiki is at:
SMSD is a Java based software library for calculating MCS.
SMSD is a Java based software library for calculating Maximum Common Subgraph (MCS) between small molecules. This will help us to find similarity/distance between two molecules. MCS is also used for screening drug like compounds by hitting molecules, which share common subgraph (substructure).
Fast way to ask for help
The main two goals of this project are: 1) via the use of the phone you can easily ask for help. Your help request will be forwarded to know people via SMS, E-mail, phone (and fax) 2) check that people that leaves alone are fine, via automated phone calls. If there are no answers or if the person ask for help during that call, an emergency request is sent to know people via SMS, E-mail, phone (and fax) To be able to use this project you have to know: * PostgreSQL * Asterisk * Php * Apache The project will be available only for linux. *Current status of the sources* There is no user interface. If you manually fill the database's tables you will be able to: a) call the Virtual Emergency Service raising a real or similated emergency b) immediately get an alert SMS and e-mail (no SSL support right now) c) record your help message that will send via e-mail after the hangup The SMS and the e-mail are translated in the language of the contacted person
Open source toolkit for creating collaborative 3D virtual worlds.
Open Wonderland is a 100% Java open source toolkit for creating collaborative 3D virtual worlds. The Open Wonderland toolkit is designed primarily for developers familiar with the Java programming language. As a developer, you can extend any part of the system and add functionality by creating modules, the Wonderland version of plugins. For full details, see the Open Wonderland project page by clicking on the following link.
Data analysis and visualization for Excel, for free
XL Toolbox is a free Excel statistics addin that helps analyzing and presenting data: Smart custom error bars, chart design, chart export to TIFF; formula builder, transpose wizard, analysis of variance (ANOVA); automatic backups, workbook management and more.
DICOM library for Qt
C++/Qt based library to manipulate DICOM data and perform DICOM communication.
Parallel implementation of Video Magnification aiming Nvidia CUDA platform. Based on http://people.csail.mit.edu/mrub/vidmag/
Rediscover the Simplicity http://www.atgclabs.com/
Request new Lab Inventory feature or module and receive a free Single User version with new feature. Help us to improve Lab Inventory. We want to hear your feedback! https://www.atgclabs.com/products/li The Lab Inventory System is an innovative, easy to learn full-featured solution for research laboratories. You can quickly and easily upload your existing Excel based inventory and get started in minutes, manage laboratory inventory, place orders and keep track of them in one place. Lab Inventory can provide you with the advanced functionality you require enabling you to regain control of your stuff. Running a laboratory is challenging, and knowing what you have in stock and who has it is extremely important to reduce costs and increase productivity, make things run efficiently. Lab Inventory can be used to track reagents, disposables, analytical instruments, computer hardware, general laboratory equipment. Lab Inventory is ideal for all types of industries, including biot
Rediscover the Simplicity http://www.atgclabs.com/
Request new Lab Inventory feature or module and receive a free Single User version with new feature. Help us to improve Lab Inventory. We want to hear your feedback! https://www.atgclabs.com/products/li You can quickly and easily upload your existing Excel based inventory and get started in minutes, manage laboratory inventory, place orders and keep track of them in one place. Lab Inventory can provide you with the advanced functionality you require enabling you to regain control of your stuff. Running a laboratory is challenging, and knowing what you have in stock and who has it is extremely important to reduce costs and increase productivity, make things run efficiently. Lab Inventory can be used to track reagents, disposables, analytical instruments, computer hardware, general laboratory equipment. Lab Inventory is ideal for all types of industries, including biotechnology, chemistry, education, dentistry, electronics, physics, medicine and more.
Rediscover the Simplicity www.atgclabs.com
Request new Lab Inventory feature or module and receive a free Single User version with new feature. Help us to improve Lab Inventory. We want to hear your feedback! https://www.atgclabs.com/products/li The Lab Inventory System is an innovative, easy to learn solution for research laboratories. You can quickly and easily upload your existing Excel based inventory and get started in minutes, manage laboratory inventory, place orders and keep track of them in one place. Lab Inventory can provide you with the advanced functionality you require enabling you to regain control of your stuff. If you are experiencing problems using the Lab Inventory System then please report your problem to email@example.com If you want to get priority help, need to get up to speed quickly, require some training or need full production support, request customization to your unique work flows or new features, please contact firstname.lastname@example.org Join us on www.linkedin.com/groups/Lab-Inventory
Creates 24h-Duty-Plans by considering preferences for up to 20 Persons
Diese schlanke und kostenlose Excel-Tabelle erlaubt es, für bis zu 20 Personen einen 24 Stunden Dienstplan zu erstellen. Die Software Berücksichtigt dabei Wünsche, Abwesenheit und Rufbereitschaften der einzelnen Personen. Nachdem eine Übersicht erstellt wurde, wird der Dienstplan mit der optimalen Verteilung der Dienste erstellt. Hierbei werden Feiertage und Wochenenden Berücksichtigt. Die Software ist nutzbar für alle Monate und Jahre.
OpenClinic is an easy to use, open source, medical records system written in PHP. It has been mainly thougth for private clinics, surgeries and private doctors. It is platform independent and it has multilanguage architecture.
Multi-technology, INDEL aware error correction for NGS data
MuffinEC is an error correction software capable of handling all types of errors (insertion deletions, mismatches and unknown bases). It officially supports four technologies (Illumina, 454, ion Torrent and PacBio - experimental) and it also has a generic setup for others (old and/or new). It is released under LGPL version 3.0. MuffinEC can use multicore systems, thanks to its OpenMP implementation. We are developing the 2nd version of MuffinEC. The beta version is already available online. The changes are listed in the VERSION_HISTORY file. Please report any problem you may encounter at the email address specified in the README file. We really appreciate your help.
ShelterOps - Animal and Wildlife data management software
ShelterOps is a PHP based software program to manage animal operations for animal welfare organizations, animal rescues, wildlife rescue/rehabilitation facilities, animal control agencies (ACOs) and any other entities that need to track animal intake, dispositions, medical procedures, assessment, etc. It offers a basic Point Of Sale (POS) system for services, licenses, merchandise and general ledger integration for accounting, as well as several optional modules to extend functionality (traps, tags, products, incidents/dispatch management, photos, etc). ShelterOps can run on a web server or be installed on a local WAMP server and can be configured for multiple locations. The animal module includes the ability to export data to PetFinder, Adopt A Pet or your website, as well as manage medical procedures, track treatment regimens, asilomar classiification and more. The core and optional modules within ShelterOps provide the framework to create a customized solution.
Canreg5 is a software package for population based cancer registries
Cancer registries need a tool to input, store, check and analyse their data. If these data are also coded and verified in a standard way, it facilitates the production of comparable analyses across registry populations. The main goal of the CanReg5 project is to provide a flexible and easy to use tool to accomplish these objectives. CanReg5 is a multi user, multi platform, open source tool to input, store, check and analyse cancer registry data. It has modules to do: data entry, quality control, consistency checks and basic analysis of the data It was designed with an emphasis on user friendliness, it has a modern user interface and is easy to navigate. Is available in several languages. (English, French, Spanish, Portuguese, Russian, Turkish, Georgian, and Chinese.)
Track Nutrition Content of Portions of Meals
The plan is to create software that can be used to input nutrition information for a whole meal that can then be used to figure out the nutrition content of a certain portion of that meal. It is difficult to answer the question: How many grams of fat are in 7 oz. of lasagna? This program seeks to answer that question and any others that are convenient. The project is in C++ and uses the Wt framework.
TTS for Basque Lapurdian dialect
AhoTTS Iparrahotsa is the TTS developed at the Aholab Signal Processing Laboratory of the University of the Basque Country (UPV/EHU) for the Lapurdian dialect of Basque. This dialect is spoken at the Northern area of the Basque speaking area (French region). This project was funded by the Euroregion Aquitaine-Euskadi under grant EUSKADI-2012-004.
Open source project for creating medical solutions