Search Results for "linux command" - Page 3

Showing 117 open source projects for "linux command"

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  • 1
    optpack

    optpack

    FE simulation based automatic global optimisation in modern Fortran

    A collection of Fortran 2003, 90 and 77 routines, modules and programs for automatic simulation based global constrained optimisation. The initial application is for FE simulation of elasto-plastic buckling of steel rods aimed at tuning the hardening model. Unix shell scripts are used extensively. High concurrency is achieved with parallel multi-start global search and with parallel MPI FE. Powell's BOBYQA or LINCOA are used (not included in this package). Automatic mesh generation of 3D...
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  • 2
    disp2sif

    disp2sif

    Stress intensity factor (SIF) calculation from crack tip displacements

    The code implements Muskhelishvili's complex function approach to calculate 2D stress intensity factors (modes I+II) from crack tip displacement fields. Surface displacements can be used with a plane stress elastic model. The code uses power/Fourier series expansion and a conformal mapping of an ellipse onto a circle.
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  • 3
    ETFOMM (Enhanced Transportation Flow Open-source-simulation Microscopic Model) is sponsored by a US DOT SBIR Program. The objective of the project is to establish a transportation flow simulation software program and its Application Program Interface. ETFOMM can be used as a DLL as a substitute for CORSIM in the TSIS package. It is compatible with TRAFED and TRAFVU. ETFOMM can also be used as a separate executable from a Windows or Linux command line. ETFOMM may also be linked...
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  • 4
    **** This page is not used for this project any longer. *** Please update your bookmarks and go to https://github.com/UUPharmacometrics/PsN
    Downloads: 0 This Week
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  • 5
    orthos

    orthos

    Simulation of EPR spectra of nitroxide biradicals

    The program Orthos is developed to performed simulation (including nonlinear least-squares fitting) of EPR spectra of nitroxide biradicals. The program capabilities include simulation of rigid-limit and slow-motional spectra, of both isotropic and aligned samples. The spectra of multiple paramagnetic species, both bi- and monoradicals can be modeled. NB: Please note that now (as of Nov 2016) the distribution is being updated so that to improve reliability, OS-universality, and the quality...
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  • 6

    erf

    error function and related functions in pure standard Fortran 2008

    Fortran 2008 added 3 new intrinsic functions: erf, erfc, erfc_scaled. However, they take only real arguments. This package provides a BSD licensed Fortran 2008 module with erf(z), where z is a complex argument. The calculation is based on calculating w(z), the Faddeyeva (plasma dispersion) function. Two algorithms are implemented: TOMS 680 and 916, http://www.netlib.org/toms/. The simple test program calculates values in the Abramowitz, Stegun.
    Downloads: 1 This Week
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  • 7
    MF-OWHM | MODFLOW OWHM

    MF-OWHM | MODFLOW OWHM

    Simulation, analysis, and management of the movement of water

    This page is kept for those that want to use the legacy v1 version. For current download, source, and information please go to: https://code.usgs.gov/modflow/mf-owhm ----------------------------------------------------------------------------------------------------------- The One-Water Hydrologic Flow Model (MODFLOW-OWHM, One-Water) is an integrated hydrologic flow (IHM) model that is an enhanced fusion of multiple MODFLOW (MF) versions. While maintaining compatibility with...
    Downloads: 4 This Week
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  • 8
    A complete compiler toolchain that will cross-compile ANSI C, K&R C, Pascal, Modula-2, Occam, Fortran and Basic for a number of architecture including, but not limited to, the 6500, 68000, Z80, i80, i86, i386 and PDP-11.
    Downloads: 0 This Week
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  • 9

    fBlog

    fBlog is a weblog engine for static content written in Fortran

    fBlog is a stand-alone weblog page generator to be uploaded (website) or viewed on its own computer (diary or notebook).
    Downloads: 0 This Week
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  • 10
    RMG - Reaction Mechanism Generator
    Notice: RMG-Java is no longer in active development. Please find the latest version written in Python at http://reactionmechanismgenerator.github.io To see the website o the old Java version of RMG, visit http://rmg.sourceforge.net RMG (Java version) is an automatic chemical reaction mechanism generator that constructs kinetic models composed of elementary chemical reaction steps using a general understanding of how molecules react (currently limited to C, H, O, and S atoms).
    Downloads: 12 This Week
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  • 11

    LSDMap

    Locally-Scaled Diffusion Maps from molecular dynamics trajectories

    LSDMap is a set of Fortran90 codes parallelised with MPI for the calculation of Locally Scaled Diffusion Maps. The eigenvectors of the diffusion matrix can be used to form a small set of reaction coordinates describing the behaviour of a high-dimensional data set such as an equilibrium MD trajectory.
    Downloads: 0 This Week
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  • 12
    ParaStation is a robust and efficient cluster middleware, consisting of a high-performance communication layer (MPI) and a sophisticated management layer. Please notice, the public development has moved to github: https://github.com/ParaStation
    Downloads: 0 This Week
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  • 13
    Pheno Analysis is a sequential data assimilation framework for use with prognostic phenology models. It uses MODIS satellite data to constrain model parameters and states.
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  • 14
    rochePlot

    rochePlot

    Schematically plot the evolution of binary stars

    RochePlot is a Fortran code using PGPlot to plot a series of binaries to illustrate the key stages in the evolution of a binary star
    Downloads: 0 This Week
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  • 15

    ANT.1D

    Quantum transport for tight-binding and ab initio Hamiltonians

    ANT.1D is a stand-alone quantum transport code for essentially one-dimensional setups described by tight-binding or ab initio Kohn-Sham Hamiltonians obtained from other codes working with atomic basis sets (Gaussian, Crystal,SIESTA). Interfaces with Crystal and Gaussian codes are available. Electrodes are described either by nanowires of finite thickness or Bethe lattice electrodes.
    Downloads: 0 This Week
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  • 16

    modelenv

    Modelling environment for environmental modelling

    An object-oriented Fortran 2003 programming environment for implementing numerical environmental simulation models, including climate and weather prediction models.
    Downloads: 0 This Week
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  • 17

    Planck Level-S

    Sources of the simulations package for the Planck satellite project

    This project contains the sources for the simulation codes used within ESA's Planck mission (http://sci.esa.int/planck/)
    Downloads: 0 This Week
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  • 18
    gMol

    gMol

    gMol molecular graphics

    We've moved to https://github.com/tjod/gMol/wiki gMol is an interactive visualization system used to display and manipulate 3-dimensional models of scientific data, such as molecular structures and surfaces. It contains both OpenGL and web browser widgets that enable flexible user interfaces.
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  • 19

    GenomeScanner

    GenomeScanner displays tag data obtained from Chip-Seq and RNA-Seq.

    The "Genome Scanner" is a program written to display tag data obtained from ChIP-Seq and RNA-Seq experiments. Programs already exist to do this job, but the research group here at NYU needed to explore different methods for scoring tag peaks and to visualize the results. "Genome Scanner" (GS) was written to be light-weight, fast and easily adapted to varied display tasks. The package also contains software to plot KM survival curves for patients based on gene expression data from tumor biopsies.
    Downloads: 0 This Week
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  • 20
    MDcons(Molecular Dynamics consensus)

    MDcons(Molecular Dynamics consensus)

    Interpretation of Biomolecular MD simulations

    MDcons is a tool to analyze conserved contacts during Molecular Dynamics (MD) simulations of Protein, Rna, Dna & Ligand based complexes. The input is either a Molecular Dynamics trajectory or a set of snapshots. The input can also be a single snapshot. The outputs are (1) map of most/less frequently conserved contacts during MD (2) a list of most/less frequently conserved contacts during MD.
    Downloads: 1 This Week
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  • 21
    PDSTRIP is a hydrodynamic strip code for seakeeping. It computes ship motions for monohulls including sailing boats. PDSTRIP has been abandoned by its initiators, who do not wish to be contacted with use questions. The position of maintainer is vacant.
    Downloads: 1 This Week
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  • 22
    wreport has moved to: https://github.com/ARPA-SIMC/wreport dballe has moved to: https://github.com/ARPA-SIMC/dballe bufr2netcdf has moved to: https://github.com/ARPA-SIMC/bufr2netcdf
    Downloads: 0 This Week
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  • 23

    Larch: Data Analysis for X-ray Spectra

    Data Processing and Analysis for X-ray Spectroscopy and More

    Larch is a scientific data processing language that is designed to be easy to use for novices and complete enough for advanced data processing and analysis. Larch provides a wide range of functionality for dealing with arrays of scientific data, and basic tools to make it easy to use and organize complex data. Larch has been primarily developed for dealing with x-ray spectroscopic and scattering data, especially the kind of data collected at modern synchrotrons and x-ray sources. ...
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  • 24
    fzcal

    fzcal

    A calculator capable of complex arithmetics

    A command line calculator capable of complex arithmetics.
    Downloads: 0 This Week
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  • 25
    IRPF90
    WARNING: Project moved to http://github.com/scemama/irpf90 IRPF90 is a Fortran90 preprocessor written in Python for programming using the Implicit Reference to Parameters (IRP) method. It simplifies the development of large fortran codes in the field of scientific high performance computing.
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