Open Source MATLAB Formats and Protocols

BioSig is a software library for processing of biomedical signals (EEG, ECG, etc.) with Matlab, Octave, C/C++ and Python. About 50 different data formats are supported.

The Systems Biology Markup Language (SBML) is an XML-based description language for representing computational models in systems biology. Visit the project web site to learn more.

This project provides the SOFA Toolbox, a toolbox for the Spatially Oriented Format for Acoustics (SOFA). The SOFA Toolbox is the successor of the SOFA API for Matlab/Octave. More information on the SOFA Toolbox can be found at https://github.com/sofacoustics/SOFAtoolbox. SOFA is a file format intended for reading, saving, and describing spatially oriented data of acoustic systems. Examples of data are head-related transfer functions (HRTFs), binaural room impulse responses (BRIRs), spatial room impulse responses (SRIR), multichannel measurements such as done with microphone arrays, and directionality data of loudspeakers. More information on SOFA can be found at https://sofaconventions.org. Here we store the release packages only. The source code can be found at https://github.com/sofacoustics/SOFAtoolbox.

Open Source Implementations for 3D-Surface Characterisation Algorithms according to ISO 25178 (Geometric Product Specification) in verifiable pseudocode (MATLAB). Implementation of an XML-based file exchange format according to upcoming ISO 25178-72.

OpenDAFF is a free, open-source software package for directional audio data - like the directivity of microphones, speakers, as well as head-related transfer functions (HRTFs)

EBF, which stands for Efficient Binary Format, is a binary file format for reading and writing binary data easily. Reading writing routines are currently available in C,C++,Fortran,Java, Python, IDL, MATLAB. A program called ebftkpy which has a set of utility functions to work with the .ebf files , e.g., viewing the contents and getting a summary, is also provided. The EBF specification is designed to be concise and easy to understand to make it easier for others to write their own code if needed. It is also designed to simplify the programming of input output routines in different programming languages. In a nutshell an EBF file is a collection of data objects. Each data object is specified by a unique name and a single file can have multiple data objects. Each data object is preceded by a meta-data or header which describes the binary data associated with it. Among other things, this header allows the files to be portable across systems with different endianess.

Tools for mass spectrometry, especially for protein mass spectrometry and proteomics: Quantification tools, converters for Applied Biosystems (Q Star and Q Trap), calculation of in-silico fragmentation spectra, converter for Mascot result files

APEX Tools is a collection of utilities used in conjunction with the processing of airborne hyperspectral data developed for the ESA-Prodex supported Airborne Prism EXperiment (APEX).

Embedded system design (VHDL description) based on Xilinx's Spartan3E Development Kit to perform real-time PID control and monitoring of time critical plants such as brushless DC motors, maglevs... vimeo.com/channels/anie prezi.com/gpbycavq499c/anie/

Axon Library (libaxon) is an Open Source, cross-platform, C++ library for reading files in Axon Binary Format. Currently only ABF2 is supported. Additionally, project include binders for Python and Matlab.

A tool to register and superpose CTF MEG SAM(g2) result and MRI image into one gray-level image.

CoRoPa stands for Computational Rough Paths. The aim of CoRoPa is to provide a software framework for various ideas related to Rough Path Theory, including rough differential equations and the digital description of serial data streams.

FieldTrip is the Matlab toolbox for EEG and MEG data. It includes algorithms for simple and advanced analysis, such as importing, preprocessing, time-frequency analysis, source reconstruction, statistical testing and connectivity analysis.

Matlab's MAT-file I/O API in JAVA. Supports Matlab 5 MAT-flie format reading and writing. Written in pure JAVA.

Search and export numerics from any text/ascii file. Data sets (scalar, vector, matrix) are given unique names, based on file content. Results can be generated for Matlab, IDL, Scilab, Octave, XML, HTML A wrapper exists for direct usage from Matlab.

Client libraries for the D-Wave Orion Web Service

primeHandle is a set of data management tools in support of the PrIMe Initiative (http://primekinetics.org). primeHandle includes graphical user interfaces for searching through data collections, editing and submitting data to the PrIMe Data Depository.

The Sound Description Interchange Format (SDIF) is an established standard for the interchange of sound descriptions and analysis data. This project provides libraries, SDIF (in C) and Easdif (in C++), tools, and wrappers to read and write SDIF files.

Provides an API, which enables the Matlab or Octave user (and developer) to incorporate Space Weather data and metadata resources from the Space Physics Interactive Data Resource (SPIDR) directly into an Matlab/Octave application. Examples included.

Fast and multi platform reader of network traces, have possible to shared date in screen, file or Matlab

this projects aims at providing a standard HRTF (Head Related Transfer Functions) fileformat specification and the tools to make be able to read and write such files. The main objective is an IFF inspired binary file, but XML equivalent will be possible

matlab2tikz is a MATLAB(R) script to convert native MATLAB(R) figures to TikZ/Pgfplots figures that integrate seamlessly in LaTeX documents. matlab2tikz supports the conversion of most MATLAB figures, including 2D and 3D plots. For plots constructed with third-party packages, your mileage may vary. Sometimes, MATLAB makes it hard to create matching LaTeX plots by keeping invisible objects around or stretching the plots too far beyond the bounding box.

GNU Octave bindings to the cfitsio library in an attempt to make a close to MATLAB toolkit for Octave.

A library providing easy, flexible, and efficient read/write access to video files using a wide variety of codecs in MATLAB on Windows and GNU/Linux platforms, using DirectShow and ffmpeg backends, respectively. Also provided are 'load' and 'imread' for bulk reading.