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The application Bio7 is an integrated development environment for ecological modelling and contains powerful tools for model creation, scientific image analysis and statistical analysis. The application itself is based on an RCP-Eclipse-Environment (Rich-Client-Platform) which offers a huge flexibility in configuration and extensibility because of its plug-in structure and the possibility of customization.

Free Java Flowchart simulator / interpreter

wizard4j offers a java engine that 'runs' flowcharts (written in xml). A 'flowchart run' creates a sequence of user interactions (java api, html forms, rs, ...).The result of a 'run' can be applied to template frameworks like Velocity or Freemarker

small & symple disassembler, resource unpacker and flowchart graphical editor

Aqueduct is a simple state machine library written in Java. Some programs can be described naturally as a state machine or a flowchart; this library is intended to simplify the development of such programs.

JLink lets users author flow charts based on ISO 5807 and IBM standards. Developers can use JLink to add flowcharts to applications, serve a flow chart over the web in PDF or PNG, or dynamically create a flowchart with Javascript, Python or Ruby scripts

FC Designer is a standalone flowchart designer written in Java.

FAST SDK is a graphical user interface based upon Eclipse RCP and GEF for editing flowcharts that can be converted into structured ones by using FAST(Flowchart Abstract Syntax Tree) and generates optimized code.