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jIPFire is an easy-to-use basic Linux iptables generator written on Java. It has some ready, very basic and general, rules that can be applied, or just displayed, and it gives you also the ability to create your own custom iptables rules.
Fireflier is a firewall tool, which is built on top of the iptables framework. You can create rules based on single incoming network packets or simply allow/deny single packets to pass. This project is discontinued. (see homepage)
PfPro is a "fat" client for managing configurations for PF-based firewalls. It is a graphical client-side application for managing multiple firewall configurations.
JWall is not just a java gui for iptables. JWall is a multi firewall management client. A secure rulebase can be built with graphical objects. Rulesets can be pushed to remote firewalls (via ssh). The remote firewall just needs to be Linux with sshd
OSA::net project main goal is to create an extensible, scalable framework for management of security related devices in middle-sized and large computer networks.