TinkerCell is a software for synthetic biology. The visual interface allows users to design networks using various biological "parts". Models can include modules and multiple cells. Users can program new functions using C or Python. www.tinkercell.
Simple, interactive plotting of 2D/3D numpy arrays using python-vtk written in pure python using pylab-syle colormaps. Intended to have minimal overhead and maximum speed. There is a pylab-style and an oo interface. Based on Kitware page examples.